PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMERI08G14760.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 226aa MW: 24651.5 Da PI: 7.3783 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.2 | 1.5e-12 | 116 | 176 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e +r rr+ +NRe+ArrsR RK+ ++ eL + v+ L + N++L +el++ +a ++ e+ OMERI08G14760.1 116 EERRRRRMVSNRESARRSRMRKQRQLSELWTQVEHLRGANRRLLDELNRALRGCADVRREN 176 67899*******************************************9888887776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.2E-12 | 114 | 178 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.2E-10 | 115 | 174 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.783 | 116 | 179 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.6E-9 | 118 | 190 | No hit | No description |
SuperFamily | SSF57959 | 9.14E-11 | 118 | 166 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 121 | 136 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 4.05E-15 | 123 | 167 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence Send to blast |
MYHHHGGHGE VASLHLLSPP NPPFFGAAAR HHHHHGLINM ALPPQAYFVP ATPPPFQEAT 60 AALAAGDDDD AAMAVFELER ILEEAAATGG GGNGSPSSGS DGCCYGMQGV APAAEEERRR 120 RRMVSNRESA RRSRMRKQRQ LSELWTQVEH LRGANRRLLD ELNRALRGCA DVRRENSRLR 180 DEKAELAGKL QLLLPRQPAP EKNTADDHSS CSSEPCKNST TTTAAE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 130 | 137 | RRSRMRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP004376 | 0.0 | AP004376.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0481F05. | |||
GenBank | AP004557 | 0.0 | AP004557.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0028A08. | |||
GenBank | AP014964 | 0.0 | AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence. | |||
GenBank | CP012616 | 0.0 | CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence. | |||
GenBank | CT831504 | 0.0 | CT831504.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115A07, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015649077.1 | 1e-109 | bZIP transcription factor RISBZ3-like | ||||
TrEMBL | A0A0E0EMK3 | 1e-165 | A0A0E0EMK3_9ORYZ; Uncharacterized protein | ||||
STRING | OMERI08G14460.1 | 1e-165 | (Oryza meridionalis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G38800.1 | 1e-10 | basic leucine-zipper 43 |