PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KN538785.1_FGP044 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | NAC | ||||||||
Protein Properties | Length: 258aa MW: 29022.8 Da PI: 8.3206 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 21.7 | 5.3e-07 | 18 | 41 | 2 | 25 |
NAM 2 ppGfrFhPtdeelvveyLkkkveg 25 pGfrFhPt+eel+ +yLk+ + KN538785.1_FGP044 18 LPGFRFHPTEEELLEFYLKQLYCS 41 59****************997655 PP | |||||||
2 | NAM | 68.7 | 1.6e-21 | 63 | 123 | 70 | 128 |
NAM 70 tgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 g r++r+t++g+Wkatg+d++v ++ ++l+glkktLv+y+grap+g+ktdWvm+eyrl KN538785.1_FGP044 63 GGGRPSRTTEHGFWKATGSDRAVRCAadPKRLIGLKKTLVYYEGRAPRGTKTDWVMNEYRL 123 4789********************98777788***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 29.175 | 1 | 144 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.05E-37 | 8 | 144 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.2E-18 | 19 | 123 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
MEQQRSRSTA AGGEVEQLPG FRFHPTEEEL LEFYLKQLYC SSNGCTRHHQ QWPVRRRAGG 60 GGGGGRPSRT TEHGFWKATG SDRAVRCAAD PKRLIGLKKT LVYYEGRAPR GTKTDWVMNE 120 YRLPDTMQLQ MQHDDMVLCK VYRKAVSLKE LEQRVAMEEL ARSTTSSGTH NTGSPLQQDS 180 SSISISSSSD AMKKEVVVVD EAAAAAHELV RPATLSLPQL EVARPQSGLE WMQEPFLTQL 240 RSPWMETWSP YYASVLNF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 8e-25 | 1 | 144 | 1 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KN538785.1_FGP044 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012614 | 0.0 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. | |||
GenBank | CU406703 | 0.0 | CU406703.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C111K18, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015643570.1 | 1e-147 | NAC domain-containing protein 22-like | ||||
Swissprot | Q10S65 | 2e-68 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A0E0AEL7 | 1e-146 | A0A0E0AEL7_9ORYZ; Uncharacterized protein | ||||
TrEMBL | A0A0E0HVR4 | 1e-146 | A0A0E0HVR4_ORYNI; Uncharacterized protein | ||||
TrEMBL | A0A0E0Q2U6 | 1e-146 | A0A0E0Q2U6_ORYRU; Uncharacterized protein | ||||
TrEMBL | A2YH56 | 1e-146 | A2YH56_ORYSI; Uncharacterized protein | ||||
TrEMBL | I1Q5F6 | 1e-146 | I1Q5F6_ORYGL; Uncharacterized protein | ||||
TrEMBL | Q5Z7Q4 | 1e-146 | Q5Z7Q4_ORYSJ; Os06g0726300 protein | ||||
STRING | OGLUM06G29360.1 | 1e-147 | (Oryza glumipatula) | ||||
STRING | ORUFI06G29930.1 | 1e-147 | (Oryza rufipogon) | ||||
STRING | OS06T0726300-00 | 1e-147 | (Oryza sativa) | ||||
STRING | ONIVA06G30950.1 | 1e-147 | (Oryza nivara) | ||||
STRING | ORGLA06G0236900.1 | 1e-147 | (Oryza glaberrima) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1770 | 38 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 2e-47 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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