PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KN538763.1_FGP014 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 84aa MW: 10009.5 Da PI: 10.3984 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.3 | 5.8e-12 | 6 | 68 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke kr rr NRe+Ar +R++a +eL++kv+ L+++N+++kke e+ +e+ +lk + KN538763.1_FGP014 6 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSTQNESMKKERETVMQEYLSLKETN 68 89**********************************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.9E-12 | 6 | 70 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.6E-11 | 6 | 69 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.14 | 8 | 71 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.4E-6 | 10 | 66 | No hit | No description |
SuperFamily | SSF57959 | 2.09E-8 | 10 | 66 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 84 aa Download sequence Send to blast |
MLTEEEKEAK RLRRVLANRE SARQTILRRQ AIRDELARKV ADLSTQNESM KKERETVMQE 60 YLSLKETNKQ LKEQAQHHLS LSLF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KN538763.1_FGP014 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | OSU04297 | 1e-138 | U04297.1 Oryza sativa Nipponbare bZIP DNA-binding factor (osZIP-2b) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006663833.1 | 4e-49 | PREDICTED: G-box-binding factor 1-like | ||||
TrEMBL | A0A0D3HRM2 | 2e-51 | A0A0D3HRM2_9ORYZ; Uncharacterized protein | ||||
TrEMBL | A0A0E0BP78 | 3e-51 | A0A0E0BP78_9ORYZ; Uncharacterized protein | ||||
TrEMBL | A0A0E0MJT9 | 2e-51 | A0A0E0MJT9_ORYPU; Uncharacterized protein | ||||
TrEMBL | A0A0E0RE03 | 2e-51 | A0A0E0RE03_ORYRU; Uncharacterized protein | ||||
TrEMBL | A3CF39 | 1e-51 | A3CF39_ORYSJ; Uncharacterized protein | ||||
TrEMBL | B8BN97 | 2e-51 | B8BN97_ORYSI; Uncharacterized protein | ||||
STRING | OGLUM12G04120.1 | 4e-52 | (Oryza glumipatula) | ||||
STRING | ORUFI12G03900.1 | 4e-52 | (Oryza rufipogon) | ||||
STRING | OPUNC12G03250.1 | 4e-52 | (Oryza punctata) | ||||
STRING | OBART12G03450.1 | 3e-52 | (Oryza barthii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3165 | 34 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19490.1 | 1e-16 | bZIP family protein |