PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KN538709.1_FGP051
Organism
Oryza longistaminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 270aa    MW: 29165.6 Da    PI: 9.3713
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KN538709.1_FGP051genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.33e-1279132558
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                        kr++r   NR +A rs +RK +++ eLe+kv++L++e ++L  +l  l++ +a+
  KN538709.1_FGP051  79 KRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSAQLTLLQNCYAT 132
                        9*********************************************99998775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-1475139IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.02577134IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-1279133No hitNo description
PfamPF001707.5E-1179132IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.7E-1279133No hitNo description
CDDcd147034.96E-2180127No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007231Biological Processosmosensory signaling pathway
GO:0008272Biological Processsulfate transport
GO:0009294Biological ProcessDNA mediated transformation
GO:0009652Biological Processthigmotropism
GO:0009970Biological Processcellular response to sulfate starvation
GO:0045596Biological Processnegative regulation of cell differentiation
GO:0051170Biological Processnuclear import
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
GO:0051019Molecular Functionmitogen-activated protein kinase binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MRSLSLDTAF FEGFSLQGGG GGGGGGGSGG SGGHKRSGSM DGVNSPFEGE SALSGGLPDY  60
AKKAMPAERI AELALIDPKR AKRILANRQS AARSKERKIK YTSELERKVQ TLQTEATTLS  120
AQLTLLQNCY ATIRVGIEAP NGLRVSNLIF CNSLETQRDT SGLTAENREL KLRLQSMEEQ  180
AKLRDALNEA LREEVQRLKI AAGQAPNMNG NPFNGGLQQQ IPPYYTQQQQ QMPYLGGHHA  240
QQRHPSHQQS SSNGGQSLSG QSLNDSMDFM
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00184DAPTransfer from AT1G43700Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKN538709.1_FGP051
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0659950.0AK065995.1 Oryza sativa Japonica Group cDNA clone:J013048G15, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015618202.11e-144transcription factor VIP1
TrEMBLA0A0E0F9Q41e-143A0A0E0F9Q4_9ORYZ; Uncharacterized protein
STRINGOMERI12G02010.11e-144(Oryza meridionalis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.12e-43VIRE2-interacting protein 1