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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
OGLUM09G10770.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 404aa MW: 43368 Da PI: 8.4379 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| OGLUM09G10770.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95.3 | 4.2e-30 | 242 | 301 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK+ ++++ pr+Y+rCt+a +Cpvkkkv+rsaed ++++ tYegeHnh+
OGLUM09G10770.1 242 VKDGYQWRKYGQKVTRDNPSPRAYFRCTFApSCPVKKKVQRSAEDSSLLVATYEGEHNHP 301
58***************************99****************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009617 | Biological Process | response to bacterium |
| GO:0009620 | Biological Process | response to fungus |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0010200 | Biological Process | response to chitin |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 404 aa
Download sequence Send
to blast |
MAGVDSQLAR APFSPTDPCK LKTTRSRSRR LYVAPPIPHE PFKCLYLALL ACFCFDYSSS 60
RAQQQRDASC SWSSSSSMDA AWRGGVGCSP VCLDLCVGLS PVREPSAARH ELLDRPAGCR 120
GGGDSKPMTN DEAKILEAKV TQMSEENRRL TEVIARLYGG QIARLGLDGS ASPPRPVSPL 180
SGKKRSRESM ETANSCDANS NRHQGGDADH AESFAADDGT CRRIKVSRVC RRIDPSDTSL 240
VVKDGYQWRK YGQKVTRDNP SPRAYFRCTF APSCPVKKKV QRSAEDSSLL VATYEGEHNH 300
PHPSPRAGEL PAAAGGAGGS LPCSISINSS GPTITLDLTK NGGAVQVVEA AHPPPPPDLK 360
EVCREVASPE FRTALVEQMA SALTSDPKFT GALAAAILQK LPEF
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Regulates, probably indirectly, the activation of defense-related genes during defense response (By similarity). Modulates plant innate immunity against X.oryzae pv. oryzae (Xoo) (By similarity). {ECO:0000250|UniProtKB:Q6EPZ2, ECO:0000250|UniProtKB:Q6QHD1}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by biotic elicitors (e.g. fungal chitin oligosaccharide) (By similarity). Induced by pathogen infection (e.g. M.grisea and X.oryzae pv. oryzae (Xoo)) (PubMed:16528562). Accumulates after treatment with benzothiadiazole (BTH) and salicylic acid (SA) (By similarity). {ECO:0000250|UniProtKB:Q6EPZ2, ECO:0000269|PubMed:16528562}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK059966 | 0.0 | AK059966.1 Oryza sativa Japonica Group cDNA clone:006-211-F11, full insert sequence. |
