PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G06770.1
Organism
Oryza glumaepatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 372aa    MW: 38747.5 Da    PI: 8.5903
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G06770.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_178.11.1e-24249311163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv+eL++eN+aL++el++lkk ++ +++e+
  OGLUM07G06770.1 249 ERELKRERRKQSNRESARRSRLRKQQECEELARKVAELTTENSALRSELDQLKKACEDMEAEN 311
                      89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165961.1E-8106226No hitNo description
Gene3DG3DSA:1.20.5.1709.7E-18248308No hitNo description
SMARTSM003383.4E-22249313IPR004827Basic-leucine zipper domain
PfamPF001704.4E-22249311IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.553251314IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-12252307No hitNo description
CDDcd147029.59E-22254304No hitNo description
PROSITE patternPS000360256271IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MRRGAAVARS XTAAAAVPTH AEWAASLQAY YAAAGHPYAW PAQHLMAAAA AGAPYGAPVP  60
FPMYHPGAAA AYYAHASMAA GVPYPTAEAM AAAAAAAGAV PVGKGKGKGA AASPEKGSSA  120
APSGDDASRS GDSGSEESSD TRDDDTDHKD SSAPKKRKSG NTSAEGEPSQ ATLVPYAAVE  180
SQYPLKGRSA SKLPVSAPGR AALPNATPNL NIGIDLWSTP PALAVPAGQG EASPGLALAR  240
RDGVAHLDER ELKRERRKQS NRESARRSRL RKQQECEELA RKVAELTTEN SALRSELDQL  300
KKACEDMEAE NTRLMGDKAQ YKGPTVTTTL GMSIDSSKTQ HHDDEGQLHK NTNNNSNGNY  360
VGGSHKPEAN SR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1265271RRSRLRK
2265272RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2891790.0AK289179.1 Oryza sativa Japonica Group cDNA, clone: J100028J17, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015644731.10.0DNA-binding protein EMBP-1
SwissprotP250322e-58EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A0E0AH790.0A0A0E0AH79_9ORYZ; Uncharacterized protein
STRINGOGLUM07G06770.10.0(Oryza glumipatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-23basic region/leucine zipper transcription factor 16