PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM07G06040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | EIL | ||||||||
Protein Properties | Length: 213aa MW: 23324.9 Da PI: 5.7847 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 156.2 | 4.1e-48 | 1 | 115 | 63 | 183 |
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSS CS EIN3 63 emevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcd 156 ++e+cn++Gf+Yg i e g+p++g+sdsL +WWk++v+fdr+gp+a++ + + ++ +l +ss h+l+++qD tlgS+Lsal+qhc+ OGLUM07G06040.1 1 MLEACNTRGFLYGVIVEAGEPMSGSSDSLHEWWKDNVSFDRAGPMALIGPAGDSPQAG---GL---ASSCLHRLQDIQDCTLGSVLSALIQHCE 88 89***********************************************955444433...33...7899************************ PP S-TTS--TTT--HHHH---S--HHHHH CS EIN3 157 ppqrrfplekgvepPWWPtGkelwwge 183 pqr+fple+g++pPWWPtG+e+wwg+ OGLUM07G06040.1 89 LPQRNFPLERGLAPPWWPTGEEAWWGR 115 *************************94 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 8.3E-55 | 1 | 117 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.8E-25 | 62 | 119 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 5.49E-23 | 65 | 118 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence Send to blast |
MLEACNTRGF LYGVIVEAGE PMSGSSDSLH EWWKDNVSFD RAGPMALIGP AGDSPQAGGL 60 ASSCLHRLQD IQDCTLGSVL SALIQHCELP QRNFPLERGL APPWWPTGEE AWWGRTRARR 120 LKTSLQITPL DDDGEEETMT TKDDSDGLED VVRGAAQDKR KREYTRSDSE SSISSNFGGK 180 FPRGSGADQL AVCSRSSRRP APWRRKGGAR STS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 4e-19 | 63 | 113 | 1 | 51 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 4e-19 | 63 | 113 | 1 | 51 | Protein ETHYLENE INSENSITIVE 3 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012610 | 2e-92 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015625091.1 | 1e-60 | putative ETHYLENE INSENSITIVE 3-like 4 protein | ||||
Swissprot | Q9SLH0 | 2e-39 | EIL1_ARATH; ETHYLENE INSENSITIVE 3-like 1 protein | ||||
TrEMBL | A0A0E0AGY8 | 1e-154 | A0A0E0AGY8_9ORYZ; Uncharacterized protein | ||||
STRING | OGLUM07G06040.1 | 1e-155 | (Oryza glumipatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP638 | 38 | 168 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27050.1 | 8e-42 | ETHYLENE-INSENSITIVE3-like 1 |