PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORGLA11G0032900.1
Organism
Oryza glaberrima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 356aa    MW: 36474.8 Da    PI: 7.9108
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORGLA11G0032900.1genomeAGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.56.7e-0997145149
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                        eke kr rr   NRe+Ar   +R++a  +eL++kv+ L+++N+++kk +
  ORGLA11G0032900.1  97 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNETMKKVA 145
                        89*******************************************9854 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.6E-595143No hitNo description
PfamPF001701.9E-797144IPR004827Basic-leucine zipper domain
SMARTSM003381.1E-697160IPR004827Basic-leucine zipper domain
CDDcd147026.07E-13102143No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MALADMAGAA PGQPEASPPP HATQEAAAAA VAKGEQEDEA EMASTRLSLE LGKVGIQSSS  60
PCSSSSSAGH PAMQPAAAAT AAPGYGPRPR HMLTEAEKEA KRLRRVLANR ESARQTILRR  120
QAIRDELARK VADLSSQNET MKKVAIRTIK KAAVAEPMDT APPAQQQAET AAAVAPPTTA  180
TPPSTAPQPS FLYTAAPAGV APVPYVWGSW PPCGPTGYEH GNPGGAAAAA APPPLCLPPC  240
AWYYPVVADP RVSSPPTSTY PQPYQEQPTS SPGGGTAEED TDDDPCSLTL AIDVDKRSAP  300
GAGGSAAGAG QHASISDREK ATAAAEARKR RKKLTKLKQM HGGGGGSRPG GGGEHW
Cis-element ? help Back to Top
SourceLink
PlantRegMapORGLA11G0032900.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126190.0CP012619.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 11 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015615785.11e-158uncharacterized protein LOC4349815
TrEMBLI1QXT70.0I1QXT7_ORYGL; Uncharacterized protein
STRINGORGLA11G0032900.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.14e-09bZIP family protein