PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORGLA07G0083400.1
Organism
Oryza glaberrima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 436aa    MW: 47301.9 Da    PI: 8.7388
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORGLA07G0083400.1genomeAGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN348.22.8e-1591227129265
                        .XX----STTS-HHHHHHHHHHHSSSSSS-TTS--T..TT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTG CS
               EIN3 129 rsseshslselqDTtlgSLLsalmqhcdppqrrfpl..ekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhms 218
                        rss    +s l D  l  + + lm+ c ppq  +pl  +  + pPWWPtG+e+ww+elg+ +    ppy+    l ka k  v  a +k + 
  ORGLA07G0083400.1  91 RSSLAMAVSGLADHVLERMVKVLMRKCHPPQALYPLigKSPLRPPWWPTGREQWWPELGAGA--VVPPYRPAPLLSKAEKEVVVVAMVKNLV 180
                        5566667777888888888999*************95456799*************999764..468***999******************* PP

                        GGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX CS
               EIN3 219 ptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss 265
                        p++e++   +r   ++ ++++  e  a+   +  e++ +   ++h  
  ORGLA07G0083400.1 181 PDFERLFMAVRMAPSVTSRITDAEARAWDDGVAGERETYMARHPHRT 227
                        ****************************9999999888888888743 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.3180.101.5E-3990225IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048735.9E-1895210No hitNo description
SuperFamilySSF1167686.93E-4595220IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MDASKKSVMT KEEQQLSPAA SPAAAVMTAE ADAINEEQDK AAAATTADHT APPPPPPPPA  60
AAVADHAGEM DMASGSGVAH LAPPAVAPAP RSSLAMAVSG LADHVLERMV KVLMRKCHPP  120
QALYPLIGKS PLRPPWWPTG REQWWPELGA GAVVPPYRPA PLLSKAEKEV VVVAMVKNLV  180
PDFERLFMAV RMAPSVTSRI TDAEARAWDD GVAGERETYM ARHPHRTTPT RAWKLMDSLK  240
PEAVRMKLKA PKPKPQVTIK VEDAAPFLTV SAAADPAAVE AAMGAIEAMR NSSKDPDAPY  300
YPMPSPLHGH NEVGPNDYPE NPAIWKEFNR KEGQLNLLRV GKKNDRMAIS DRVDGGASGS  360
GPRKGYLVMK TYKKAQEYYR ELRNKGAMAS GAGVKIEDDS ETESDNEDEK AYEKAKAKAK  420
ARAVYQQNKG IQENYW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A4e-169620810121ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapORGLA07G0083400.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126150.0CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015646400.20.0uncharacterized protein LOC107276281
TrEMBLI1Q9P20.0I1Q9P2_ORYGL; Uncharacterized protein
STRINGORGLA07G0083400.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP159701112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.12e-14ETHYLENE-INSENSITIVE3-like 3