PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORGLA02G0292000.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 361aa MW: 38589 Da PI: 9.5158 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.2 | 2.3e-15 | 281 | 329 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +r+rr++kNRe+A rsRqRK+a++ eLe +v++L++ N++L+k+ +e+ ORGLA02G0292000.1 281 RRQRRMIKNRESAARSRQRKQAYMMELEAEVAKLKELNDELQKKQDEML 329 79***************************************98877654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.8E-13 | 277 | 342 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.197 | 279 | 331 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.7E-15 | 281 | 332 | No hit | No description |
SuperFamily | SSF57959 | 6.43E-11 | 281 | 331 | No hit | No description |
Pfam | PF00170 | 2.6E-13 | 281 | 331 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.31E-24 | 281 | 333 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 284 | 299 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence Send to blast |
MDFPGGSGRQ QQQQQQLPPM TPLPLARQGS VYSLTFDEFQ STLGGVGKDF GSMNMDELLR 60 SIWTAEESHA VGAATTTTAT TASVAAAEHA AVGAPPVQRQ GSLTLPRTLS QKTVDEVWRD 120 MMCFGGGGAS TAPAAAETPP PAHRQQTLGE ITLEEFLVRA GVVREDMSVP PVPPAPTPTA 180 AAVPPPPPPQ QQTPMLFGQS NVFPPMVPPL SLGSGLVSGA VGHGGGGAAS LVSPVRPVSS 240 NGFGKMEGGD LSSLSPSPVP YVFNGGLRGR KAPGIEKVVE RRQRRMIKNR ESAARSRQRK 300 QAYMMELEAE VAKLKELNDE LQKKQDEMLE QQKNEILERM SRQVGPTAKR ICLRRTLTGP 360 W |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that mediates abscisic acid (ABA) signaling (PubMed:18931143, PubMed:19947981, PubMed:27424498, PubMed:27325665). Can regulate the expression of a wide spectrum of stress-related genes in response to abiotic stresses through an ABA-dependent regulation pathway. Confers ABA-dependent drought and salinity tolerance (PubMed:18931143, PubMed:27325665). Binds specifically to the ABA-responsive elements (ABRE) in the promoter of target genes to mediate stress-responsive ABA signaling (PubMed:27325665, PubMed:27424498). {ECO:0000269|PubMed:18931143, ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:27325665, ECO:0000269|PubMed:27424498}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | ORGLA02G0292000.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA) (PubMed:18315698, PubMed:18931143). Induced by drought, salt and osmotic stresses (PubMed:18931143). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:18931143}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KP779638 | 0.0 | KP779638.1 Oryza nivara OsbZIP23 (bZIP23) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015625853.1 | 0.0 | bZIP transcription factor 23 | ||||
Swissprot | Q6Z312 | 0.0 | BZP23_ORYSJ; bZIP transcription factor 23 | ||||
TrEMBL | I1P4L4 | 0.0 | I1P4L4_ORYGL; Uncharacterized protein | ||||
STRING | ORGLA02G0292000.1 | 0.0 | (Oryza glaberrima) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP706 | 38 | 147 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19290.1 | 9e-42 | ABRE binding factor 4 |