PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORGLA01G0280700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 163aa MW: 18257.8 Da PI: 7.4573 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.2 | 5.5e-11 | 9 | 58 | 1 | 50 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 e+el+++r+ NReA r++R++Kka + Lee+vk+L + N++L +l+ ORGLA01G0280700.1 9 EEELRKTRKPLGNREAVRKYREKKKAHAAFLEEEVKKLRTTNQQLLRRLQ 58 789******************************************98876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.8E-12 | 9 | 76 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.8E-15 | 9 | 77 | No hit | No description |
PROSITE profile | PS50217 | 8.979 | 11 | 58 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 3.7E-12 | 11 | 58 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.23E-9 | 12 | 59 | No hit | No description |
CDD | cd14686 | 4.28E-10 | 14 | 67 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence Send to blast |
MASGENNVEE ELRKTRKPLG NREAVRKYRE KKKAHAAFLE EEVKKLRTTN QQLLRRLQGH 60 ISLEAEVVRL RALLFDIRGK IDAEIGTFPF QKQCSFGSVT CTDHSPCFNT STEVAVREES 120 SRPTIVDCGI DGTGIISHEL DIPKMVNSVD VIPSFVNSAS LTE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | ORGLA01G0280700.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP003221 | 0.0 | AP003221.2 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0003D09. | |||
GenBank | AP014957 | 0.0 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015618027.1 | 1e-116 | basic leucine zipper 23 | ||||
Refseq | XP_015618034.1 | 1e-116 | basic leucine zipper 23 | ||||
TrEMBL | A0A0D3EV53 | 1e-116 | A0A0D3EV53_9ORYZ; Uncharacterized protein | ||||
TrEMBL | A0A0E0N3R4 | 1e-116 | A0A0E0N3R4_ORYRU; Uncharacterized protein | ||||
TrEMBL | A2ZYR0 | 1e-116 | A2ZYR0_ORYSJ; Uncharacterized protein | ||||
TrEMBL | I1NSG7 | 1e-116 | I1NSG7_ORYGL; Uncharacterized protein | ||||
STRING | ORUFI01G37470.1 | 1e-117 | (Oryza rufipogon) | ||||
STRING | ORGLA01G0280700.1 | 1e-117 | (Oryza glaberrima) | ||||
STRING | OBART01G34150.1 | 1e-117 | (Oryza barthii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3831 | 36 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16770.1 | 5e-26 | bZIP family protein |