PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB09G21260.1
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 585aa    MW: 65055.5 Da    PI: 7.1229
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB09G21260.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.54.4e-11197240141
                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                   e++ k  rr+++NReAAr+sR+RKka+i++Le    + ++Le+e
  OB09G21260.1 197 ERDPKTLRRLAQNREAARKSRLRKKAYIQQLESsriRLAQLEQE 240
                   6777999************************9633355555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.9E-8195245No hitNo description
SMARTSM003384.5E-7197260IPR004827Basic-leucine zipper domain
PfamPF001703.1E-8198240IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.082199241IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-7201242No hitNo description
PROSITE patternPS000360204219IPR004827Basic-leucine zipper domain
PfamPF141446.3E-28299373IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 585 aa     Download sequence    Send to blast
MMSGSESRQE RQHQHQHQHQ HHQEMNISFG MMNHHYGAQH HHHPPPSSSS SSSMHAAAAS  60
FMSTKEASAG AYDHLGELDQ ALFMYLDHGN HAPSTHQEQR QTLNIFPSQP MHVEPSPKGE  120
ISLVLSPAPV GSKIPRSPDD HHHHHQQQAA MEELATGSRR QDHHLQHQPF GAEPAGINRD  180
VKPVAAKDHR RGASTGERDP KTLRRLAQNR EAARKSRLRK KAYIQQLESS RIRLAQLEQE  240
LHTARAQGVF FPGSSGLLAE PGVAGKGVPL GGIDGALSSE AAMFDVEYGR WQEEHYRLMY  300
ELRAALQQHL PEGELQMYVE SCLAHHDEVA AIKDGVIKGD VFHLISGVWR SPAERCFLWL  360
GGFRPSEVIK MLLAHVEPLT EQQIVGVYGL QQSALETEEA LTQGLDALYQ SLSDTVVSDA  420
LSCPANVANY MGQMAVAMNK LSTLEGFVRQ AENLRQQTLH RLQQVLTTRQ MARSLLAVSD  480
YFHRLRTLSS LWVTRPRQPP QDQQQSGGPP TRSPPPPGAX XXXXXXXXXX XXXXXXXXXX  540
XXXXXXXXXP AAGPAAERRP PHLIAAAAGA GRDDDDRNEM MTPFS
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB09G21260.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9669280.0EU966928.1 Zea mays clone 298194 DNA binding protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015696815.10.0PREDICTED: transcription factor TGA2-like
SwissprotQ52MZ21e-169TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLJ3MYP70.0J3MYP7_ORYBR; Uncharacterized protein
STRINGOB09G21260.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78763543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-145bZIP family protein