PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB09G20300.1
Common NameLOC102701103
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 182aa    MW: 20500.9 Da    PI: 7.8843
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB09G20300.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1408.5e-1383137357
                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                   e +r rr+++NRe+ArrsR RK+ ++ eL+  v  L   N++L +el++    ++
  OB09G20300.1  83 EERRRRRMISNRESARRSRMRKQRQLSELRGQVVHLRDANRRLLDELNQAMRGCS 137
                   67899******************************************99887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-1078134No hitNo description
SMARTSM003386.5E-1581145IPR004827Basic-leucine zipper domain
PfamPF001704.0E-1082137IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.55383134IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-1085134No hitNo description
PROSITE patternPS00036088103IPR004827Basic-leucine zipper domain
CDDcd147024.23E-1490134No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MLQHHYYGEV ASLHCLSPPS LPFSSHYHSS NMITTMPSSP FHFPAATICE PIQEVLPVAA  60
AAGNCPAGSG STDDAYQMAA AEEERRRRRM ISNRESARRS RMRKQRQLSE LRGQVVHLRD  120
ANRRLLDELN QAMRGCSDVH CENGRLRKER AELQARLEHL MQGQKNTSPS SSSEPCENND  180
TE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197104RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB09G20300.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006660738.11e-133PREDICTED: basic leucine zipper 43-like
TrEMBLJ3MYF11e-132J3MYF1_ORYBR; Uncharacterized protein
STRINGOB09G20300.11e-132(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G38800.12e-09basic leucine-zipper 43