PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OB09G12290.1 | ||||||||
Common Name | LOC102722519 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 477aa MW: 52368.2 Da PI: 7.4508 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.7 | 1.8e-11 | 190 | 218 | 5 | 33 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k rr+++NReAAr+sR+RKka+i++Le OB09G12290.1 190 KTLRRLAQNREAARKSRLRKKAYIQQLES 218 6789***********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.4E-5 | 186 | 248 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.795 | 188 | 230 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 2.5E-8 | 188 | 229 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.3E-8 | 189 | 233 | No hit | No description |
SuperFamily | SSF57959 | 2.5E-7 | 190 | 224 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 193 | 208 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.6E-26 | 275 | 347 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 477 aa Download sequence Send to blast |
MVGSGDQEED RQQHHHHHHH HLLPSELPLG FRAGSRPASP AAMIASSSMS KESSSYDMAD 60 FDQASLFLYL DSHDQQSIQE QRQTLNIFPS QPMHVADPVH EAKSAGVAMA MLPNGNQLQV 120 LPSPNKSPDQ QGGQKITSSA PTNPSSPNLP LPNSAKDNKT SLIKKEGTSS GKGATSSDPE 180 IEGRRILDPK TLRRLAQNRE AARKSRLRKK AYIQQLESSR IRLSQLEQQV HAARVQGALL 240 GTGDQHQVLP SGPSAASLFD MEYGRWVEEH SKLIFQLRAA LNEQMAESQL QVFVSGAMAQ 300 HDELLSLKGA IARADIFHLL CGVWASPAER CFLWLGGFRP SEAIKVMLKQ VEPVSEGQLM 360 SIYELQQSVK GTEDALSHAM DSLHHSLSDT VAAPDVAGAG GFMGHMSLAI NKISAMEDIV 420 RQADGLRQQT LHKLQHMLTV RQAARCFVAI SDYFHRLRAL STLWVARPRQ EEGGPAM |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | OB09G12290.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK106988 | 0.0 | AK106988.1 Oryza sativa Japonica Group cDNA clone:002-120-A05, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015696803.1 | 0.0 | PREDICTED: transcription factor TGA2-like isoform X1 | ||||
Swissprot | Q6H434 | 0.0 | TGAL7_ORYSJ; Transcription factor TGAL7 | ||||
TrEMBL | J3MW50 | 0.0 | J3MW50_ORYBR; Uncharacterized protein | ||||
STRING | OB09G12290.1 | 0.0 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2732 | 36 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-125 | bZIP family protein |
Link Out ? help Back to Top | |
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Entrez Gene | 102722519 |
Publications ? help Back to Top | |||
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