PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB07G15280.1
Common NameLOC102699421
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 314aa    MW: 32758.8 Da    PI: 7.217
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB07G15280.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_176.33.8e-24191253163
                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                   e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv+eL++eN aL+ el++lkk ++ +++e+
  OB07G15280.1 191 ERELKRERRKQSNRESARRSRLRKQQECEELARKVAELTTENNALRTELDQLKKACEDMEAEN 253
                   89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165963.8E-858168No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-17189250No hitNo description
SMARTSM003389.2E-22191255IPR004827Basic-leucine zipper domain
PfamPF001701.6E-21191253IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.484193256IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.05E-12194249No hitNo description
CDDcd147023.71E-20196246No hitNo description
PROSITE patternPS000360198213IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MYHPGAAAAY YAHASMAAGV PYPTAEAVAA AAAAAAAAAG AVPEGKGKGK GAGTSPEKGS  60
SAAPSGDDAS RSGDSGSEES SDTRDDDTDH KDSSAPKKRK SGNTSAEGEP SQVALMPFAA  120
VESPYQLKGR SASKLPVSAP GRAALPNATP NLNIGIDLWS ASPALAVPAG QGEASPGLAL  180
ARRDGAGQLD ERELKRERRK QSNRESARRS RLRKQQECEE LARKVAELTT ENNALRTELD  240
QLKKACEDME AENTRLIGDK AQYQGPTVTT TLGMSIDSSK TQHHDNEGQL HKNTNNNSNG  300
NYVGSSHKPE ANSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1207213RRSRLRK
2207214RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB07G15280.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2891790.0AK289179.1 Oryza sativa Japonica Group cDNA, clone: J100028J17, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006658391.20.0PREDICTED: DNA-binding protein EMBP-1-like
SwissprotP250321e-59EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLJ3MJE60.0J3MJE6_ORYBR; Uncharacterized protein
STRINGOB07G15280.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.15e-23basic region/leucine zipper transcription factor 16