PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB07G14680.1
Common NameLOC102715957
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 445aa    MW: 46564.5 Da    PI: 4.6582
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB07G14680.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.81.2e-2481411128
           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknr.atksgyWkatgk..dkevl 93 
                   lpp ++F+Ptd+ lv +yL +++egk+l+l+ vi e+d +++ Pw+L + v  ++  e +fF++++    +g r++r +   g W+a+g   d e l
  OB07G14680.1   8 LPPDVKFEPTDDKLVARYLLARIEGKPLPLSGVILEADPLSAPPWTLLADVGLGDAdEAFFFAEARAMDGKGGRQKRtVEGGGCWRAQGMivDGERL 104
                   6899**************************99***************866666555499******************5555899*****84422222 PP

           NAM  94 sk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         + e v++kk+L f      +  ++ Wvmhey++
  OB07G14680.1 105 LVpdsgGLEIVWCKKMLSFIPDG--EKASSGWVMHEYAI 141
                   2245655666**********433..334799******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.23E-306160IPR003441NAC domain
PROSITE profilePS5100529.5178160IPR003441NAC domain
PfamPF023655.6E-159140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MAAAGGGLPP DVKFEPTDDK LVARYLLARI EGKPLPLSGV ILEADPLSAP PWTLLADVGL  60
GDADEAFFFA EARAMDGKGG RQKRTVEGGG CWRAQGMIVD GERLLVPDSG GLEIVWCKKM  120
LSFIPDGEKA SSGWVMHEYA ITAPPKLASS PMRLYRIRFS GHGKKRRREP ERHGGQEGGG  180
GEQAAPRRAV EEDALPPQPI PPPAAVASFD DQGCSGVPPA AAVVSDGTNQ HSSGVVDDSW  240
PVSDDLPGNA PIEEHVLPPL PGPPPPAAVA SFADQGCSGV PPAAAVVSDG TNQHSSGVVG  300
DSWPVSDDLP GNAPTEELVL PPLPGPPPPP PPPAVASSDE DFVSRGADQG GSSAVPPPDP  360
AAPIRDGQDG AVAETAPPAE VASLAIANDG GPVWGSFSRY RFFFRKLLLP EVIPHGAPAV  420
QIPRIYSYRF WKMNLSLTAE IRRKY
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB07G14680.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006658368.10.0PREDICTED: uncharacterized protein KIAA1522-like
TrEMBLJ3MJ860.0J3MJ86_ORYBR; Uncharacterized protein
STRINGOB07G14680.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.12e-12NAC domain containing protein 47