PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OB05G30320.1

Common Name

LOC102705628

Organism

Oryza brachyantha

Taxonomic ID

4533

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

VOZ

Protein Properties

Length: 656aa MW: 71879 Da PI: 5.5379

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OB05G30320.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	421.8	1.1e-129	309	526	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 p+ps++lgpkcalwdc rp++gse+++dyc+ +ha laln+ gl+gt+pv+rp+gidlkdg+lfaalsak qgk+vgip+cegaat+kspwna+elf OB05G30320.1 309 PSPSQYLGPKCALWDCGRPVRGSEECKDYCNPYHAGLALNDdGLLGTRPVMRPRGIDLKDGPLFAALSAKNQGKNVGIPVCEGAATTKSPWNAPELF 405 89************************************9799************************************************* PP VOZ 97 dlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdek 193 dlsllege++rewlffd+prrafesgnrkqrslpdy+grgwhesrkqvmk+fgglkrsyymdpqpss++ewhl+eyein++dalalyrle+k++d+k OB05G30320.1 406 DLSLLEGESLREWLFFDTPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYYMDPQPSSNYEWHLFEYEINDSDALALYRLEYKSSDTK 502 ********************************************************************************************* PP VOZ 194 ksakgkvskdsladlqkklgrlta 217 +s+k+k+++++l+++q+++++l+a OB05G30320.1 503 RSVKSKLTSSPLNEIQQQMVKLSA 526 ********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence Send to blast
MAGDPTAGGV GGRGSSGGKG SSRSSSRHQQ FRNLAKTRVD DLQEMFSGLQ SARKESRSAD 60 AALLEEQVHH MLREWRAELS VPSPASSLQN SQSQGNKREA SDPPSETLRL LQLAGAEEED 120 DATSKLVMPR SPLPMPASSH EGHGHGQAGH NLNPVLQGGT AEMVPHSPLQ MPSSHQSHGH 180 GQNLNPNMQG EAVLGSAAAP QQSLDQGMQD DCGDAAGAAN AMFHDQLYYI DHELDIDDFL 240 RDDDYKMNLS GSNPDGPNTL QGLDQLEHQQ YNLPLDLPPP NSYVDTNNSA QSSGDVFFHM 300 SDLLTTMYPS PSQYLGPKCA LWDCGRPVRG SEECKDYCNP YHAGLALNDD GLLGTRPVMR 360 PRGIDLKDGP LFAALSAKNQ GKNVGIPVCE GAATTKSPWN APELFDLSLL EGESLREWLF 420 FDTPRRAFES GNRKQRSLPD YNGRGWHESR KQVMKDFGGL KRSYYMDPQP SSNYEWHLFE 480 YEINDSDALA LYRLEYKSSD TKRSVKSKLT SSPLNEIQQQ MVKLSADSPV ENKRTARSRP 540 KANQKDNNSN TYPAVNTPNQ ASASNAHQPM SLNTPNQASA SNSHQPMSLN APDQVNVSNA 600 YQTVPPSQAG PSNTYHPASQ MDQMTFLDGS VVYGPHLPYG YSTERSDFYW NPTDGT

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence Send to blast

MAGDPTAGGV GGRGSSGGKG SSRSSSRHQQ FRNLAKTRVD DLQEMFSGLQ SARKESRSAD  60
AALLEEQVHH MLREWRAELS VPSPASSLQN SQSQGNKREA SDPPSETLRL LQLAGAEEED  120
DATSKLVMPR SPLPMPASSH EGHGHGQAGH NLNPVLQGGT AEMVPHSPLQ MPSSHQSHGH  180
GQNLNPNMQG EAVLGSAAAP QQSLDQGMQD DCGDAAGAAN AMFHDQLYYI DHELDIDDFL  240
RDDDYKMNLS GSNPDGPNTL QGLDQLEHQQ YNLPLDLPPP NSYVDTNNSA QSSGDVFFHM  300
SDLLTTMYPS PSQYLGPKCA LWDCGRPVRG SEECKDYCNP YHAGLALNDD GLLGTRPVMR  360
PRGIDLKDGP LFAALSAKNQ GKNVGIPVCE GAATTKSPWN APELFDLSLL EGESLREWLF  420
FDTPRRAFES GNRKQRSLPD YNGRGWHESR KQVMKDFGGL KRSYYMDPQP SSNYEWHLFE  480
YEINDSDALA LYRLEYKSSD TKRSVKSKLT SSPLNEIQQQ MVKLSADSPV ENKRTARSRP  540
KANQKDNNSN TYPAVNTPNQ ASASNAHQPM SLNTPNQASA SNSHQPMSLN APDQVNVSNA  600
YQTVPPSQAG PSNTYHPASQ MDQMTFLDGS VVYGPHLPYG YSTERSDFYW NPTDGT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	OB05G30320.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK069076	0.0	AK069076.1 Oryza sativa Japonica Group cDNA clone:J023004H20, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006654646.1	0.0	PREDICTED: transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-112	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	J3M8V8	0.0	J3M8V8_ORYBR; Uncharacterized protein
STRING	OB05G30320.1	0.0	(Oryza brachyantha)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-109	vascular plant one zinc finger protein

Link Out ? help Back to Top
Entrez Gene	102705628

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]