PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB05G24300.1
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 657aa    MW: 70280.2 Da    PI: 9.6708
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB05G24300.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.17.7e-13181243163
                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                   e++ +r+ r+++NRe+A+ sRqRKk ++eeLe+kvk++ +   +L ++++    e a+l++++
  OB05G24300.1 181 EEDKRRAARLMRNRESAQLSRQRKKRYVEELEDKVKSMNSVINDLNSRISFVMAENATLRQQL 243
                   5677899**********************************99*******9999999999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-14180245IPR004827Basic-leucine zipper domain
PfamPF001704.1E-11182243IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.048183243IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.9E-16185244No hitNo description
SuperFamilySSF579591.2E-11185243No hitNo description
CDDcd147042.24E-19186237No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042538Biological Processhyperosmotic salinity response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005783Cellular Componentendoplasmic reticulum
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 657 aa     Download sequence    Send to blast
MERDVRGMGW TIFVHHVSPC SISTSESRFP PLGVLFLFPE TIPLIFKSNR DLPLGAFDGL  60
DFDLPGDFSV EDFLLRSPER DDSGEGSAAG SGPTASPSSS PTTSASNSAV ANGSCEVKHE  120
ESDEGRSGAD PKWSLKRKQS SPGLSSDVAK CRRSGDGDVS PSASASRTAV DSDEGGTVCE  180
EEDKRRAARL MRNRESAQLS RQRKKRYVEE LEDKVKSMNS VINDLNSRIS FVMAENATLR  240
QQLSGGSANL PPPGVYPPPI PGMHFPWVPP GYAMRPHGSH VPLVPIPRLK PQQPVPASKV  300
AKKPESKKSG ENKNKTKTKT KKVASVSLLG LLLIMLVFGA FIPGFNHNFG MGGQSDNVVF  360
RNFGQSHARV LSVSSQDKSG LNNSEMFGVD VGKMAGNADG PGKKHQPAQN SSEILPALLY  420
VPRNGKHVKI NGNLIIHSVL ASEKAVAHKA SKGDSDQSAK DHKETSVAIA RYLSLPGRDM  480
NRQETPSADG PLPQWFREGM AGPILNSGMC SEVFQFDISA ASSNPGGVIP ASPIVNSSSV  540
NATEKIPAHS AAYQGKLKNR RVMYNEAIPL TGKTANNTEP FNRTSESSSK LPDSKPASSV  600
VVSVLADPRE AGNGDGDPRV SPKPLSKIFV VVLVDGARYV TYSCTLPFKS ASPHLVN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183205KRRAARLMRNRESAQLSRQRKKR
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22084314}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB05G24300.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000269|PubMed:22084314}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0731420.0AK073142.1 Oryza sativa Japonica Group cDNA clone:J033024D10, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006655320.20.0PREDICTED: bZIP transcription factor 17-like
SwissprotQ6AU900.0BZP39_ORYSJ; bZIP transcription factor 39
TrEMBLJ3M7560.0J3M756_ORYBR; Uncharacterized protein
STRINGOB05G24300.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82283545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.14e-93bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Cheng CH, et al.
    A fine physical map of the rice chromosome 5.
    Mol. Genet. Genomics, 2005. 274(4): p. 337-45
    [PMID:16261349]
  3. Takahashi H,Kawakatsu T,Wakasa Y,Hayashi S,Takaiwa F
    A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response.
    Plant Cell Physiol., 2012. 53(1): p. 144-53
    [PMID:22084314]
  4. Ohta M, et al.
    Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants.
    J. Exp. Bot., 2013. 64(18): p. 5429-41
    [PMID:24153418]
  5. Cheng Q, et al.
    An alternatively spliced heat shock transcription factor, OsHSFA2dI, functions in the heat stress-induced unfolded protein response in rice.
    Plant Biol (Stuttg), 2015. 17(2): p. 419-29
    [PMID:25255693]