PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB03G45270.1
Organism
Oryza brachyantha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 322aa    MW: 34410.9 Da    PI: 6.4137
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB03G45270.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1284.8e-09194218125
                   XXXXCHHHCHHHHHHHHHHHHHHHH CS
        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKk 25 
                   e+elkrerrkq+NRe+ArrsR+RK+
  OB03G45270.1 194 ERELKRERRKQSNRESARRSRLRKQ 218
                   89**********************8 PP
2bZIP_128.43.7e-092382752663
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1  26 aeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                   +e+eeL +kv+eL+  N+aL+ el++lkk ++ +++e+
  OB03G45270.1 238 QECEELSQKVAELTVVNTALRTELDKLKKDCEDMEAEN 275
                   89********************************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-16187273No hitNo description
PfamPF001703.9E-7194218IPR004827Basic-leucine zipper domain
SMARTSM003387.2E-14194277IPR004827Basic-leucine zipper domain
CDDcd147023.26E-13199268No hitNo description
PROSITE patternPS000360201216IPR004827Basic-leucine zipper domain
PfamPF001701.5E-6238275IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MASSASPASS KSDDDRRPEG DRHPRGDPAG TAAQTHAEWA ASMQAYYAAA AAAAGGHPYA  60
RPPPPQSVPL MAGGASAPAS AEGKSKRKNS GGPSGEDSSG SGDGGSEDSS DKRDDTDERG  120
LSPAKWRKLS HADTEGETSQ ASMSEQNTAK AAPNLNIGMD IWSTPPMAAV PSGHVDVNAA  180
PASRQDKAIS QMDERELKRE RRKQSNRESA RRSRLRKQVV PVINKTFCML RVVFLWVQEC  240
EELSQKVAEL TVVNTALRTE LDKLKKDCED MEAENSQLMD EMAQSEGSSV VTTLSIKIDT  300
PKDHRGSSAQ LNKQHTNGDG KG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1210216RRSRLRK
2210217RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapOB03G45270.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015690120.11e-163PREDICTED: DNA-binding protein EMBP-1-like
SwissprotP250324e-46EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLJ3LU010.0J3LU01_ORYBR; Uncharacterized protein
STRINGOB03G45270.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.15e-28basic region/leucine zipper transcription factor 16