PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OB02G40680.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 186aa MW: 20410.2 Da PI: 9.073 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.7 | 1.6e-15 | 126 | 175 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r+rr++kNRe+A rsRqRK+a++ eLe +v++L++ N++L+k+ +e+ + OB02G40680.1 126 RRQRRMIKNRESAARSRQRKQAYMMELEAEVAKLKELNEELQKKQDEILE 175 79****************************************99888655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.0E-11 | 122 | 180 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.3 | 124 | 176 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.4E-14 | 126 | 176 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 3.32E-25 | 126 | 178 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.4E-15 | 126 | 176 | No hit | No description |
SuperFamily | SSF57959 | 3.94E-11 | 126 | 175 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 129 | 144 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
MDFPGGSGRP QQQQLPPMTP LPLARQGSVY SLTFDEFQST LGGVGKDFGS MNMDELLRSI 60 WTAEESHAGG GGVAPLVSPV RPVSSNGFGK MEGGDLSSLS PSPVPYIFNG GLRGRKAPGI 120 EKVVERRQRR MIKNRESAAR SRQRKQAYMM ELEAEVAKLK ELNEELQKKQ DEILEQQKNE 180 GFGGCI |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that mediates abscisic acid (ABA) signaling (PubMed:18931143, PubMed:19947981, PubMed:27424498, PubMed:27325665). Can regulate the expression of a wide spectrum of stress-related genes in response to abiotic stresses through an ABA-dependent regulation pathway. Confers ABA-dependent drought and salinity tolerance (PubMed:18931143, PubMed:27325665). Binds specifically to the ABA-responsive elements (ABRE) in the promoter of target genes to mediate stress-responsive ABA signaling (PubMed:27325665, PubMed:27424498). {ECO:0000269|PubMed:18931143, ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:27325665, ECO:0000269|PubMed:27424498}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | OB02G40680.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA) (PubMed:18315698, PubMed:18931143). Induced by drought, salt and osmotic stresses (PubMed:18931143). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:18931143}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KP779638 | 1e-123 | KP779638.1 Oryza nivara OsbZIP23 (bZIP23) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015688745.1 | 1e-112 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
Swissprot | Q6Z312 | 2e-63 | BZP23_ORYSJ; bZIP transcription factor 23 | ||||
TrEMBL | J3LHF1 | 1e-132 | J3LHF1_ORYBR; Uncharacterized protein | ||||
STRING | OB02G40680.1 | 1e-133 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP706 | 38 | 147 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G45249.1 | 2e-28 | abscisic acid responsive elements-binding factor 2 |