PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OB02G14920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 400aa MW: 42888.2 Da PI: 10.1649 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.2 | 5.7e-16 | 246 | 292 | 4 | 50 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +kr rr+ +NRe+ArrsR+RK+a ++ Le v++L +eN +L k+l OB02G14920.1 246 VKRMRRMVSNRESARRSRKRKQAHLADLESQVDQLRGENASLFKQLT 292 79**************************************9997664 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.8E-16 | 243 | 307 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.013 | 245 | 291 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.9E-15 | 246 | 292 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.5E-13 | 246 | 297 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.6E-13 | 247 | 295 | No hit | No description |
CDD | cd14702 | 2.24E-22 | 248 | 298 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 250 | 265 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 400 aa Download sequence Send to blast |
MKKKAPMSCG SPTRTEKALR LQDGRVGKYG GEGRAKRPAV DAFHGELTPS PPKRAFFSSP 60 PPLGGGLPRW GISKSIRLRR RHHHRSSSSH PRRRRASERA IGPRGKTMKK CPSEINFEAF 120 IHGGSGEADP AAAAEQKPAG SHPPFMMFSA ADLSAFSFAD SSTITGAIPN HIWPQTQSLN 180 ARHPAVSTTI ESQSSICAAA SPTSATNLTM KESQTLGGTS GSDSDSESMF DIEGGPCEQS 240 TNPLDVKRMR RMVSNRESAR RSRKRKQAHL ADLESQVDQL RGENASLFKQ LTDANGQFTT 300 AVTDNRILKS DVEALRVKVK MAEDMVARGA MSCGLGHLGG LSPALNARQR CVPDVLTGLD 360 YAGDDPFTGL SPPDQGQMPG GEVVDGCWGW DSHSNGGMSK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 78 | 94 | RRRHHHRSSSSHPRRRR |
2 | 259 | 265 | RRSRKRK |
3 | 259 | 266 | RRSRKRKQ |
4 | 261 | 266 | SRKRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that possesses broad binding specificity for DNA promoter elements with the core sequence 5'-ACGT-3'. May be involved in the regulation of genes expressed during seed development (PubMed:7919992). Binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:7919992}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | OB02G14920.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK070674 | 0.0 | AK070674.1 Oryza sativa Japonica Group cDNA clone:J023063K11, full insert sequence. | |||
GenBank | RICRITA1A | 0.0 | L34551.1 Oryza sativa transcriptional activator protein (RITA-1) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015688882.1 | 0.0 | PREDICTED: basic leucine zipper 9-like isoform X1 | ||||
Swissprot | Q6ETX0 | 1e-172 | RSBZ3_ORYSJ; bZIP transcription factor RISBZ3 | ||||
TrEMBL | J3LA25 | 0.0 | J3LA25_ORYBR; Uncharacterized protein | ||||
STRING | OB02G14920.1 | 0.0 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2095 | 37 | 96 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 2e-40 | basic leucine zipper 9 |
Publications ? help Back to Top | |||
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