PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OB01G17130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 363aa MW: 39496 Da PI: 10.5392 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.3 | 5.2e-11 | 186 | 230 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ OB01G17130.1 186 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRV 230 8999*********************************99998665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.6E-14 | 182 | 246 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.76 | 184 | 240 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.8E-14 | 186 | 240 | No hit | No description |
Pfam | PF00170 | 7.3E-10 | 186 | 236 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.62E-11 | 186 | 240 | No hit | No description |
CDD | cd14703 | 4.61E-23 | 187 | 237 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 189 | 204 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence Send to blast |
MAQLPPKIPT MATAWPEFGG GHHHHAHGHH HQRSPSMGAF LAAPLPPFPP PPPAPANGGA 60 HQQQQQQPSW VDEFLDFSAA KRGAHRRSVS DSVAFLDPVA DDNAGVGAHD FDRLDDDQLM 120 SMFSDDLQPP PPQQQPAAPA ASASSPSDHN SMNDEKQDKG ETEEAQSECD GATPGQPASP 180 ATVDPKRVKR ILANRQSAQR SRVRKLQYIS ELERSVTSLQ TEVSALSPRV AFLDHQRSLL 240 TLGNSHLKQR IAALAQDKIF KDGGTEEGDR EAAANLPPAK PQERGIHTGR RGRPGPRQRQ 300 GRPDRQRGDR RARGLVIDRP RSGRAVCSEV ALASAPRQPR ALPRAGRRHV RFGALFGFAF 360 FGV |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription regulator. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | OB01G17130.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269|PubMed:18065552}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK100944 | 0.0 | AK100944.1 Oryza sativa Japonica Group cDNA clone:J023138F18, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015694867.1 | 1e-139 | PREDICTED: basic leucine zipper 2-like | ||||
Swissprot | Q5QNI5 | 1e-149 | BZP02_ORYSJ; Basic leucine zipper 2 | ||||
TrEMBL | J3KXK7 | 0.0 | J3KXK7_ORYBR; Uncharacterized protein | ||||
STRING | OB01G17130.1 | 0.0 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1322 | 38 | 125 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 2e-75 | bZIP family protein |
Publications ? help Back to Top | |||
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