PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OBART07G26760.1
Organism
Oryza barthii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 540aa    MW: 59001.6 Da    PI: 6.0922
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OBART07G26760.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN34754.9e-1455741626354
                      XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3  26 edkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlil 119
                      +++++ t+a+++++s+eqarrkkmsraQDgiLkYMlk+mevcnaqGfvYgiipekgkpv+gasd+Lr+WWkekv+fdrngpaai+kyqa+n+++
  OBART07G26760.1  57 AAEDKRTRAAQQRQSQEQARRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWKEKVRFDRNGPAAIAKYQADNAVP 150
                      455666999************************************************************************************* PP

                      XXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHH CS
             EIN3 120 sgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtav 213
                      + + +   ++ + +hsl+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP+G+e+ww+e+g++k+ g+ppykkphdlkkawkv+vLtav
  OBART07G26760.1 151 GCDGDAGGAAPAGPHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGSEAWWPEAGVPKELGPPPYKKPHDLKKAWKVAVLTAV 244
                      ***999888************************************************************************************* PP

                      HHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX... CS
             EIN3 214 ikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ssslrkqspkvtlsceqkedvegkkeskikhvqavktta... 302
                      ikhmsp+++++r+l+rqsk+lqdkm+ake  ++l+vl+qee+++ ++++   ++    ++ ++++s + ++dveg +  +  + + +k+++   
  OBART07G26760.1 245 IKHMSPDVDKVRRLVRQSKCLQDKMTAKEIVTWLAVLKQEEDLYLKLHPGalPPP--LSAASFNASVSGEYDVEGVDGDEAGNNNLQKAQNdat 336
                      *************************************************965444..478899***********55555545555555555568 PP

                      .............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXXX CS
             EIN3 303 .............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqney 354
                                                   ++++++kr  +p+   +  s+  ++tc + q+++s+++l+f d+n+++ ++y
  OBART07G26760.1 337 afmdltttmdaalsnnkflimplmkeeaiDVDFIQKRS-EPELMLSSDSHARVYTCGNVQCPHSNYALGFLDRNERNAHQY 416
                      99***********************************9.55555555666678**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.4E-12256285No hitNo description
Gene3DG3DSA:1.10.3180.109.8E-71164293IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.75E-58165288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 540 aa     Download sequence    Send to blast
MMGAAVTMVD RRMAFAAEAD VDSKAAFGFF GGECFVGEGD LVNPAPPPQQ VDEGGFAAED  60
KRTRAAQQRQ SQEQARRKKM SRAQDGILKY MLKMMEVCNA QGFVYGIIPE KGKPVSGASD  120
NLRSWWKEKV RFDRNGPAAI AKYQADNAVP GCDGDAGGAA PAGPHSLHEL QDTTLGSLLS  180
ALMQHCDPPQ RRFPLEKGVP PPWWPEGSEA WWPEAGVPKE LGPPPYKKPH DLKKAWKVAV  240
LTAVIKHMSP DVDKVRRLVR QSKCLQDKMT AKEIVTWLAV LKQEEDLYLK LHPGALPPPL  300
SAASFNASVS GEYDVEGVDG DEAGNNNLQK AQNDATAFMD LTTTMDAALS NNKFLIMPLM  360
KEEAIDVDFI QKRSEPELML SSDSHARVYT CGNVQCPHSN YALGFLDRNE RNAHQYACKH  420
NAAAAAAESK PPPPHIFEPL GSFDFDLPVD GQRCLAGLMT MYDNDVAAAT QMHHHHHQQQ  480
QANFFIRDDA PFGGDVAATA AAAPEFRFSS NFNVSGGGAV DYGGAMQQPP AKYAGSNWFY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A9e-711622931132Protein ETHYLENE INSENSITIVE 3
4zds_B9e-711622931132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512, PubMed:25995326). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Required for ethylene-promoted coleoptile elongation (PubMed:25995326). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:25995326}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding and metyhl jasmonate. {ECO:0000269|PubMed:19798512}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0749720.0AB074972.2 Oryza sativa Japonica Group OsEIL2 mRNA for ethylene-insensitive-3-like protein, complete cds.
GenBankAP0038180.0AP003818.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1200_C08.
GenBankAP0149630.0AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
GenBankCP0126150.0CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015646574.10.0ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ8W3L90.0EIL2_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 2
TrEMBLA0A0D3GV500.0A0A0D3GV50_9ORYZ; Uncharacterized protein
STRINGOBART07G26760.10.0(Oryza barthii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-132ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]
  3. Yang C, et al.
    MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Plant Physiol., 2015. 169(1): p. 148-65
    [PMID:25995326]