PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009609677.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 147aa MW: 16514.9 Da PI: 9.9076 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 24.6 | 5.1e-08 | 128 | 147 | 1 | 20 |
---SS-EEEEEEE--TT-SS CS WRKY 1 ldDgynWrKYGqKevkgsef 20 +dDg+ WrKYGqK++ +s++ XP_009609677.1 128 VDDGHVWRKYGQKQILDSPY 147 59*************99985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.9E-7 | 113 | 147 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 9.19 | 123 | 147 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.09E-6 | 124 | 147 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.9E-5 | 129 | 146 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MDSQWPENSL ADLKMLIKEL NCGQEFTHKL REVIKKPLGN GYTNIFAENL VGKIMSSFCK 60 TLSILNSSNS NENSPIPVVA VFPCRKDGRM SPEDSTGSCK KSSSKDRRGC NKKRKISVKS 120 IKETSTLVDD GHVWRKYGQK QILDSPY |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009609677.2 | 1e-105 | PREDICTED: probable WRKY transcription factor 70, partial | ||||
Refseq | XP_016448472.1 | 1e-103 | PREDICTED: probable WRKY transcription factor 70 | ||||
TrEMBL | A0A1S3Y8U0 | 1e-102 | A0A1S3Y8U0_TOBAC; probable WRKY transcription factor 70 | ||||
STRING | XP_009609677.1 | 1e-105 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4230 | 21 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 5e-12 | WRKY DNA-binding protein 70 |