PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009607987.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | EIL | ||||||||
Protein Properties | Length: 615aa MW: 69683.8 Da PI: 6.3155 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 499.7 | 1.4e-152 | 50 | 427 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 +el++rmw+d+m+lkrlke++k+ ke ++ +k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv gasd+Lr+WW XP_009607987.1 50 DELERRMWRDKMKLKRLKEMTKS----KEG-VDPAKHRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVGGASDNLREWW 139 79******************998....677.9999************************************************************ PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS EIN3 96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190 k+kv+fdrngpaai+kyqa+++i++ +++++ ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWPtG+e+ww++lgl+k+q XP_009607987.1 140 KDKVRFDRNGPAAIAKYQADHAIPGMNEGSNP-VGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGQEDWWPQLGLQKEQ 233 ******************************87.99************************************************************ PP -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.XXXXXXXXXXXXXXXXX CS EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.slrkqspkvtlsceqke 282 g+ppykkphdlkkawkv+vLtavikhm p+i++ir+l+rqsk+lqdkm+akes+++l++++qee+++++ +++ ++ s s + ++++++ XP_009607987.1 234 GPPPYKKPHDLKKAWKVGVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAIISQEEALARERYPDrcPPlSYAGASGTFMSNDSSEY 328 *************************************************************************8644577789************ PP XXXXXXXXX.XXXXXXXXXX..............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXX CS EIN3 283 dvegkkeskikhvqavktta..............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadkn 347 dveg +e+ +v+++k ++ +++++rkrk +++e++ +++++ ++tc+ q+++se +++f+d++ XP_009607987.1 329 DVEGVQEEPNFDVHEQKPNHlsllnisverfketlplqqqshpnkddlitSLDFTRKRK-QSDEQTVTMDQK-IYTCEFLQCPYSELHHGFQDRS 421 ***77777779999999999**************************************9.566666666665.5********************* PP XXXXXX CS EIN3 348 sisqne 353 ++++++ XP_009607987.1 422 ARDNHQ 427 ****98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 5.8E-129 | 50 | 297 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 6.1E-75 | 171 | 307 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.35E-61 | 176 | 300 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 615 aa Download sequence Send to blast |
MMMFDDMRFC GDLDFFSAPL KEVEAAAPQT EPEPEPVVDD DYSDEEIDVD ELERRMWRDK 60 MKLKRLKEMT KSKEGVDPAK HRQSQEQARR KKMSRAQDGI LKYMLKMMEV CKAQGFVYGI 120 IPEKGKPVGG ASDNLREWWK DKVRFDRNGP AAIAKYQADH AIPGMNEGSN PVGPTPHTLQ 180 ELQDTTLGSL LSALMQHCDP PQRRFPLEKG VSPPWWPTGQ EDWWPQLGLQ KEQGPPPYKK 240 PHDLKKAWKV GVLTAVIKHM FPDIAKIRKL VRQSKCLQDK MTAKESATWL AIISQEEALA 300 RERYPDRCPP LSYAGASGTF MSNDSSEYDV EGVQEEPNFD VHEQKPNHLS LLNISVERFK 360 ETLPLQQQSH PNKDDLITSL DFTRKRKQSD EQTVTMDQKI YTCEFLQCPY SELHHGFQDR 420 SARDNHQLAC PFRKTSQLGV SNFHVNEVKP TVFPQQYVQS KSPVLPVNPG PGPPSFGLFG 480 VGVPEDGQRM IDELMSFYDS NIQGNKIQNT GNVALTKGQP HQQPRLNQDN YLHSQGMMEG 540 NIFKDTSISA IHPILPQGNL TDQCKVLNSS FNAGSSDNFN FMLGSLFDLQ STNYSGSLPG 600 IGCDNTPKQD IPIWY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 1e-82 | 175 | 306 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 1e-82 | 175 | 306 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 382 | 387 | TRKRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY248905 | 0.0 | AY248905.1 Nicotiana tabacum EIL3 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009607986.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Refseq | XP_009607987.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A1S4C2Q5 | 0.0 | A0A1S4C2Q5_TOBAC; ETHYLENE INSENSITIVE 3-like 1 protein | ||||
TrEMBL | A0A1U7Y6S7 | 0.0 | A0A1U7Y6S7_NICSY; ETHYLENE INSENSITIVE 3-like 1 protein | ||||
STRING | XP_009607986.1 | 0.0 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |