PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009607152.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 395aa    MW: 44007.2 Da    PI: 6.9915
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009607152.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM91.41.5e-284016110129
             NAM  10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevlskkgelvg 101
                      deel+ +yL kk+ +++++   +++evd++ ++P++L  +++ ++ k+wyf s++++ky++g ++n   a ++gyW+  g+d  +++ +g+l+g
  XP_009607152.1  40 ADEELIIHYLDKKMMDQPFPN-YTVHEVDVFLYHPQKLSqMHHPSQAKKWYFLSPASNKYTEGGQSNGvsANNDGYWEPCGTDSLIHK-DGKLIG 132
                     59****************999.67**************8446666888**************999998545679***********999.99**** PP

             NAM 102 lkktLvfykgr.apkgektdWvmheyrle 129
                      +ktL +  g+ +++ ++t+W+mheyrle
  XP_009607152.1 133 YRKTLNYIAGKlDKDRKRTEWLMHEYRLE 161
                     ********9862455679*********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100534.59431182IPR003441NAC domain
PfamPF023652.1E-1540160IPR003441NAC domain
SuperFamilySSF1019416.02E-3341182IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MEGKGKQDST ANVTNVNKNC ADIGVIPKQE VLVDDQLSGA DEELIIHYLD KKMMDQPFPN  60
YTVHEVDVFL YHPQKLSQMH HPSQAKKWYF LSPASNKYTE GGQSNGVSAN NDGYWEPCGT  120
DSLIHKDGKL IGYRKTLNYI AGKLDKDRKR TEWLMHEYRL EGSRDVPTSD DMQRVFCKLF  180
KSNNKLMAAE EKEATKFAAP NDGVSGADPT IQGPENANDI TNDKGPSNGH SRDLLPMPET  240
DQDTTMPTPT PQHVQGTTLT RTGRQKATNN VVRNKRPRRK RDSHPPPASH QGLMMPHLPN  300
ANSQPQRDQG IRLPPPLPQN DERKTLPIST GPYKANNGVV VTDNGPSNSL VVPCCPEYIL  360
DEPSFDWTVA NSWLQDGTVL PSRPQHGSSF FCSTP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-204118427167NO APICAL MERISTEM PROTEIN
1ut4_B2e-204118427167NO APICAL MERISTEM PROTEIN
1ut7_A2e-204118427167NO APICAL MERISTEM PROTEIN
1ut7_B2e-204118427167NO APICAL MERISTEM PROTEIN
3swm_A3e-204118430170NAC domain-containing protein 19
3swm_B3e-204118430170NAC domain-containing protein 19
3swm_C3e-204118430170NAC domain-containing protein 19
3swm_D3e-204118430170NAC domain-containing protein 19
3swp_A3e-204118430170NAC domain-containing protein 19
3swp_B3e-204118430170NAC domain-containing protein 19
3swp_C3e-204118430170NAC domain-containing protein 19
3swp_D3e-204118430170NAC domain-containing protein 19
4dul_A2e-204118427167NAC domain-containing protein 19
4dul_B2e-204118427167NAC domain-containing protein 19
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1275279RPRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009607152.10.0PREDICTED: NAC domain-containing protein 67-like isoform X2
TrEMBLA0A1S3Z2F20.0A0A1S3Z2F2_TOBAC; uncharacterized protein LOC107782254 isoform X2
STRINGXP_009607149.10.0(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.12e-24NAC domain containing protein 100