PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009605650.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 109aa MW: 12667.4 Da PI: 10.0351 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 66.6 | 7e-21 | 5 | 107 | 5 | 108 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 +F+P+d +l+++ L k v+gk l++ee i +d+y+ ePw+L +++ +k yf ++ +kk++t+ r nr+t +g+W ++ k k++l++ ++ XP_009605650.1 5 AKFRPSDTDLIMQ-LLKFVAGKCLPTEELIVFADVYSKEPWQLIGDMNS-KKTHYFLTQLKKKKPTDARFNRTTGNGTWTQQNKGKQILDEdDSL 97 69*********77.667899999999999**************866654.577899999*******************************85566 PP NAM 99 lvglkktLvf 108 +g k++L++ XP_009605650.1 98 IIGYKRSLTY 107 69******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 21.343 | 1 | 109 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.7E-8 | 5 | 108 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.05E-19 | 6 | 107 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 109 aa Download sequence Send to blast |
MEKNAKFRPS DTDLIMQLLK FVAGKCLPTE ELIVFADVYS KEPWQLIGDM NSKKTHYFLT 60 QLKKKKPTDA RFNRTTGNGT WTQQNKGKQI LDEDDSLIIG YKRSLTYKX |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU753264 | 1e-170 | EU753264.1 Nicotiana tabacum NAC transcription factor (NAC7) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009605650.1 | 6e-76 | PREDICTED: NAC transcription factor 56-like, partial | ||||
TrEMBL | A0A1S3XXK2 | 1e-70 | A0A1S3XXK2_TOBAC; NAC domain-containing protein 30-like | ||||
TrEMBL | B3VK75 | 2e-71 | B3VK75_TOBAC; NAC transcription factor | ||||
STRING | XP_009605650.1 | 2e-75 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9815 | 7 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 2e-13 | NAC domain containing protein 83 |