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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009603475.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
GRAS |
Protein Properties |
Length: 563aa MW: 62186.1 Da PI: 4.6061 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009603475.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 447.7 | 7.7e-137 | 195 | 560 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
lv++L++cAea+++++++la+alL+++ la +++ +m ++a+yf+eALa++++r ly ps+ ++ ++ l++ f+e++P+lkf+h
XP_009603475.1 195 LVHTLMACAEAIQQEKMKLAEALLKQIGFLAVSQAGAMGKVATYFAEALARKVYR----LY----PSNPNDPAFTDLLQM--HFYETCPYLKFAH 279
689****************************************************....44....444443334555444..5************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
+taNqaIlea++++++vH+iDf+++qG+QWpaLlqaLa Rp+g+p++R+Tg+g+p++++++ l+++g++La++Ae+++v+fef+ +va++l+dl+
XP_009603475.1 280 FTANQAILEAFANKNKVHVIDFSMKQGMQWPALLQALALRPGGAPTFRLTGIGPPSQDNTDHLQQIGWKLAQLAESINVEFEFRGFVANSLADLD 374
*********************************************************************************************** PP
GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak.....lprese 280
+++++++gE++aVn++++lh+ll++++ +e+ vL++vk+l+P+++++veqea+hn++ F++rf+e+l+yys+lfdsle l++ s+
XP_009603475.1 375 ASMFDIREGETVAVNSMFELHQLLARPGGIEK----VLSFVKDLKPEIFTIVEQEANHNGPVFMDRFTESLHYYSTLFDSLEGCggggeLGPVSD 465
*******************************9....*********************************************8766777799999* PP
GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+++ +++++lgr+i+n+v+ceg +r+erhetl++Wr r+++aGF+pv l+++a kqa++ll+ ++ + gyrvee++g+l+lgW++rpL+++SaW+
XP_009603475.1 466 QDKLMSEVYLGRQICNLVSCEGVDRVERHETLAQWRTRFNSAGFEPVLLGSNAFKQASMLLALFAgGGGYRVEENNGCLMLGWHTRPLIATSAWK 560
*****************************************************************9999*************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009723 | Biological Process | response to ethylene |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
GO:0010187 | Biological Process | negative regulation of seed germination |
GO:0010218 | Biological Process | response to far red light |
GO:0042176 | Biological Process | regulation of protein catabolic process |
GO:0042538 | Biological Process | hyperosmotic salinity response |
GO:2000033 | Biological Process | regulation of seed dormancy process |
GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 563 aa
Download sequence Send
to blast |
MKRDQTMPYE QLEDSFSGGC SSAAGCSEKG NMWEEDGGVD DELLAVLGYK VKASDMAEVA 60 QKLEQLEKVM GSVEQDNLSF LASETVHYNP SDLSSWLESM ISELNPQDPF SNSFTTQTTN 120 QVYEDSSSFD SDLTAIPGKA VFPQIEYSTH EPQQPQSKRF KPTTTTELSS SISTRPAEST 180 RPVVLVDSQD NGVRLVHTLM ACAEAIQQEK MKLAEALLKQ IGFLAVSQAG AMGKVATYFA 240 EALARKVYRL YPSNPNDPAF TDLLQMHFYE TCPYLKFAHF TANQAILEAF ANKNKVHVID 300 FSMKQGMQWP ALLQALALRP GGAPTFRLTG IGPPSQDNTD HLQQIGWKLA QLAESINVEF 360 EFRGFVANSL ADLDASMFDI REGETVAVNS MFELHQLLAR PGGIEKVLSF VKDLKPEIFT 420 IVEQEANHNG PVFMDRFTES LHYYSTLFDS LEGCGGGGEL GPVSDQDKLM SEVYLGRQIC 480 NLVSCEGVDR VERHETLAQW RTRFNSAGFE PVLLGSNAFK QASMLLALFA GGGGYRVEEN 540 NGCLMLGWHT RPLIATSAWK LSS
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT369118 | 0.0 | KT369118.1 Capsicum annuum putative DELLA protein GAI mRNA, complete cds. |