PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009600194.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 468aa MW: 52068.1 Da PI: 9.2667 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.7 | 2.1e-32 | 192 | 248 | 3 | 60 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkvers d+++ ei+Y+geHnh+k XP_009600194.1 192 DGYNWRKYGQKQVKGSEYPRSYYKCTHLKCPVKKKVERSF-DGQIAEIVYRGEHNHPK 248 9***************************************.***************85 PP | |||||||
2 | WRKY | 100.5 | 1e-31 | 384 | 441 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+vkgs +prsYYrCts++C+++k ver+++dpk++++tYeg+Hnh+ XP_009600194.1 384 EDGFRWRKYGQKVVKGSSYPRSYYRCTSPKCNMRKFVERTTDDPKAFITTYEGKHNHS 441 7********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.0E-29 | 180 | 249 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.48E-25 | 189 | 249 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.1E-36 | 190 | 248 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.4E-25 | 192 | 247 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 23.697 | 192 | 249 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.0E-31 | 374 | 443 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.09E-27 | 378 | 443 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 32.535 | 378 | 443 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.5E-35 | 383 | 442 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.8E-25 | 384 | 440 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009957 | Biological Process | epidermal cell fate specification | ||||
GO:0010214 | Biological Process | seed coat development | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 468 aa Download sequence Send to blast |
MEVNEGAKIA IARPVASRPR CPIYKSFSEL LAGAIDISST DVHSEMAITA IRPKTVRLKP 60 ATNNALVDDL SSQVDMSGAP VGSRSDNILQ LLEKPKVLFK PMAKHAPRKT IPLLENKGSF 120 ASDQQQEIAE AEAHVQSANE VKQQHDHTTE SQQSLLAKSD KKIVHSTIVS ENTEEVEQSL 180 INTSNVDRPS YDGYNWRKYG QKQVKGSEYP RSYYKCTHLK CPVKKKVERS FDGQIAEIVY 240 RGEHNHPKPQ PPKRNLSDGQ GRAAVCNDTS KGTNNPSWSN LLPQTSEAYV CRMENQNDVG 300 LSMHSAYSSK APCFYDSIAA AGMHTAARNS EDSAEGSKKL EATCDEPKTK RRKIEGQSNG 360 AGTSGESEFP YMPNQNTTDS EITEDGFRWR KYGQKVVKGS SYPRSYYRCT SPKCNMRKFV 420 ERTTDDPKAF ITTYEGKHNH SVPNRRPNSE ASKTSSKSST IKEKSYVT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 6e-29 | 183 | 443 | 1 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 6e-29 | 183 | 443 | 1 | 77 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009600193.1 | 0.0 | PREDICTED: WRKY transcription factor 44 isoform X1 | ||||
Refseq | XP_009600194.1 | 0.0 | PREDICTED: WRKY transcription factor 44 isoform X1 | ||||
Refseq | XP_018626129.1 | 0.0 | PREDICTED: WRKY transcription factor 44 isoform X1 | ||||
TrEMBL | A0A1S3XZF0 | 0.0 | A0A1S3XZF0_TOBAC; WRKY transcription factor 44-like | ||||
STRING | XP_009600193.1 | 0.0 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37260.1 | 2e-87 | WRKY family protein |