PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009587360.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | WRKY | ||||||||
Protein Properties | Length: 158aa MW: 17660.6 Da PI: 6.9596 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 27.7 | 5.3e-09 | 139 | 158 | 2 | 21 |
--SS-EEEEEEE--TT-SS- CS WRKY 2 dDgynWrKYGqKevkgsefp 21 +Dg++WrKYGqKe+ gs+fp XP_009587360.1 139 EDGFTWRKYGQKEILGSRFP 158 7****************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.8E-6 | 136 | 158 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.18E-6 | 137 | 158 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 8.869 | 139 | 158 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.0E-5 | 139 | 158 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence Send to blast |
MDETTATILY GCKLAKELEA NLQNWANQPQ FTLNKTEEIV AVFNNVKERL SYYHHQQQQA 60 LEFFHAAEML GERPATAAFA VHGLPPAQES DQMGVSDSSR GGGSSSSSSQ RQRRRTGDTD 120 RRTVSVAAPR MGNLELPPED GFTWRKYGQK EILGSRFP |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009587360.2 | 1e-116 | PREDICTED: WRKY transcription factor 55 | ||||
TrEMBL | A0A1S3Y8X6 | 1e-110 | A0A1S3Y8X6_TOBAC; WRKY transcription factor 55-like | ||||
STRING | XP_009587360.1 | 1e-116 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9280 | 18 | 24 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40740.1 | 2e-12 | WRKY DNA-binding protein 55 |