PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016512874.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 368aa    MW: 42061.5 Da    PI: 7.8791
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016512874.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.81.9e-1416025338128
             NAM  38 diykv.ePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektd.Wvmheyrl 128
                     diy    Pw++  ++ + eek  yfF++ +k++++  r +r+ ++g+Wk +    ++++ kg++vg ++ L f + r+++ge+ + W+m+ey++
  XP_016512874.1 160 DIYGDqPPWEIFgASDYPEEKVHYFFTRLKKQKREHIRVRRTCANGRWKGQTGIDPIKNGKGTVVGFRRCLKFQTSRSKEGEHNKiWLMKEYSV 253
                     66654268999733333356677999999999999**************888889****9**************999999986544******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.732119276IPR003441NAC domain
SuperFamilySSF1019417.19E-19164275IPR003441NAC domain
PfamPF023651.4E-7166253IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
WGDRRCRLAR ADEGAQMQDL AAQARFAGAE VIAQKRPRFC YWSVRRSGEG RRSASAVSIP  60
AITATSQTRG DAQTPASRTL EQVVQRLQTS GAPPAQPLQL LRTMCFWFLV FSHLRWGDSR  120
YGLARADEGA QMMDLAALVG FAGAEPYIPC RRYGNFRLAD IYGDQPPWEI FGASDYPEEK  180
VHYFFTRLKK QKREHIRVRR TCANGRWKGQ TGIDPIKNGK GTVVGFRRCL KFQTSRSKEG  240
EHNKIWLMKE YSVGDDFFRK NNILKEDVVV CRIKKNIRAE KNHGVTMEEQ DVVKIIEAML  300
HEPDEDYSTT VQPASICQAE HQVMDETQKM NEHNNSSYIN DCSNHQEEIN WADDVLLDID  360
DFGDIICC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532600.0EU753260.1 Nicotiana tabacum NAC transcription factor (NAC3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016512874.10.0PREDICTED: uncharacterized protein LOC107829916, partial
TrEMBLA0A1S4DHW70.0A0A1S4DHW7_TOBAC; uncharacterized protein LOC107829916
STRINGXP_009627678.11e-144(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.16e-11NAC domain containing protein 2