PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016507083.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 122aa MW: 14445.4 Da PI: 9.7993 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 61.3 | 3.1e-19 | 12 | 116 | 2 | 101 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvkaeek....ewyfFskrdkkyatgkrknratksgyWkatgkdk 90 p+G rFhPtd e++ +yL v++++l+ ++ ++ +d+y ePw++ + ++++++ yf ++++k+++t kr +r++ +g+Wk +gk + XP_016507083.1 12 PMGHRFHPTDREVL-KYLIGFVRDDPLHSQNElMQVADLYADkEPWQIFEVYDQGNNnynnTRYFITPQKKEKPTWKRVSRTVGKGTWKPQGKGR 105 89**********99.9**********88766647777*997559****743333222233255******************************** PP NAM 91 evlskkgelvg 101 ev++ kg+l+g XP_016507083.1 106 EVFDDKGRLMG 116 ***98887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.1E-17 | 7 | 116 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 18.192 | 11 | 122 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-7 | 12 | 105 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence Send to blast |
MEYSQAKCFS RPMGHRFHPT DREVLKYLIG FVRDDPLHSQ NELMQVADLY ADKEPWQIFE 60 VYDQGNNNYN NTRYFITPQK KEKPTWKRVS RTVGKGTWKP QGKGREVFDD KGRLMGAPDI 120 KF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016507083.1 | 5e-89 | PREDICTED: NAC domain-containing protein 101-like | ||||
TrEMBL | A0A1S4D187 | 1e-87 | A0A1S4D187_TOBAC; NAC domain-containing protein 101-like | ||||
STRING | XP_009762991.1 | 2e-79 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1024 | 13 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.2 | 2e-11 | Arabidopsis NAC domain containing protein 87 |