PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016504577.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 322aa    MW: 37308.5 Da    PI: 4.5353
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016504577.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.83.5e-2221324128
             NAM   4 GfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     G rFhPt  e++ +yL   v++++l++++  ++ +d+y   ePw++ +      +++++  yf ++++k+++t kr +r++ +g+Wk + k ++v
  XP_016504577.1   2 GHRFHPTGREVL-KYLVGFVRDEPLPFQNElMQVADLYADkEPWQIFEaydrGNNNNNNTRYFITPQKKEKPTWKRVSRTVGKGTWKLQNKGRDV 95 
                     99********99.9**********99987746666*997559****642442222344466********************************** PP

             NAM  93 lskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                     +++kg+l+g  k+L +  ++++++ ++ +W+m ey+l
  XP_016504577.1  96 FDNKGRLMGYVKSLKYIpTNKSSNNVNGEWLMTEYSL 132
                     *****************767888999*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100526.4921155IPR003441NAC domain
PfamPF023656.5E-112132IPR003441NAC domain
SuperFamilySSF1019413.01E-252155IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MGHRFHPTGR EVLKYLVGFV RDEPLPFQNE LMQVADLYAD KEPWQIFEAY DRGNNNNNNT  60
RYFITPQKKE KPTWKRVSRT VGKGTWKLQN KGRDVFDNKG RLMGYVKSLK YIPTNKSSNN  120
VNGEWLMTEY SLFDRYLVAR ETKNKGFVIC KIKKKGKPGD KKNGNNIEEV VNDEKMREIE  180
EFIKSVLQED VQVEDNGIRS SGTIAKDDQE NNIIQYVEED QVRDHVLGLL GSPEDIVNGV  240
DDENVQYCVD QGDEGQVHLL EEYIDSVMQS EDVQAEDNRI IMSNDIIAKD DQENMEYQVE  300
DHQHATLWAS PEDVDLDTIN FC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016504577.10.0PREDICTED: NAC domain-containing protein 41-like
TrEMBLA0A1S4CTL30.0A0A1S4CTL3_TOBAC; NAC domain-containing protein 41-like
STRINGXP_009602879.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.16e-12NAC-domain protein 101