PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016502907.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 335aa    MW: 38664.2 Da    PI: 7.5875
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016502907.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM76.27.7e-24922203128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     +G+rFhPt+ el+ ++Lk+ ++g++l+ e   ++ +diy    Pw++  ++ + eek +yfF++ +k++++ +r +r+ ++g+Wk +    ++++
  XP_016502907.1  92 MGVRFHPTEAELI-NFLKRFLKGEPLPSECPnFQLADIYGDqPPWEIFgASDHPEEKVCYFFTRLKKQKSEHTRVRRTCANGTWKGQTGIDPIKN 185
                     7************.9**********88755559999***87368***733333466788**************************888889**** PP

             NAM  95 kkgelvglkktLvfykgrapkgektd.Wvmheyrl 128
                      kg++vg ++ + f + r+++ge+ + W+m+ey++
  XP_016502907.1 186 GKGTVVGFRRCFKFQTSRSKEGEHNKiWLMKEYSV 220
                     9**************999999986544******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.93E-2783242IPR003441NAC domain
PROSITE profilePS5100526.70890243IPR003441NAC domain
PfamPF023652.6E-1592220IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MRDLAALARF AGAEVIAQKR LRFCGWSVRR SGEGRRFSSL VTGVHPQRTV VVLVFAYCGN  60
CYCLILVFLY KQEKETTIYS TSRLPIRRGC IMGVRFHPTE AELINFLKRF LKGEPLPSEC  120
PNFQLADIYG DQPPWEIFGA SDHPEEKVCY FFTRLKKQKS EHTRVRRTCA NGTWKGQTGI  180
DPIKNGKGTV VGFRRCFKFQ TSRSKEGEHN KIWLMKEYSV GDDFFRKNNI PKEDIAVCRI  240
KKNIRGEKNH GVTMEEQDVA KIIEAMLHEP DEDYCITVQP APICHAEHQV MDETQKMNEH  300
NNSSYINDCS NYQEEINWAD DVLLDIDDFV DIICC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532600.0EU753260.1 Nicotiana tabacum NAC transcription factor (NAC3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016502907.10.0PREDICTED: protein SOMBRERO-like
TrEMBLA0A1S4CNS00.0A0A1S4CNS0_TOBAC; protein SOMBRERO-like
STRINGXP_009627678.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-17NAC domain containing protein 2