PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016497886.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 171aa    MW: 19656 Da    PI: 5.6491
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016497886.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.21.5e-123189563
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                    ++ +r+++NRe+ArrsR RK++ ++eL   v +L ++N +    ++  ++++ ++++e+
  XP_016497886.1 31 RKRKRMISNRESARRSRMRKQKHLDELMAQVTTLRKQNNQILTSMNVTTQHYLNVEAEN 89
                    6789***********************************99999888888888777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-102071No hitNo description
SMARTSM003386.6E-182791IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.2312992IPR004827Basic-leucine zipper domain
PfamPF001702.2E-93176IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.58E-123183No hitNo description
CDDcd147028.46E-183282No hitNo description
PROSITE patternPS0003603449IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MASSSGTSSG SSLFLQNSGS EEDLQELMDQ RKRKRMISNR ESARRSRMRK QKHLDELMAQ  60
VTTLRKQNNQ ILTSMNVTTQ HYLNVEAENS ILRAQLAELS HRLESLYEII TFLEANNNCN  120
GLANMDHNQE EPYSFNFAQN EPMVDGFNMT NSWNYLCANQ PILTADVLLQ Y
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13051RKRKRMISNRESARRSRMRKQK
24350RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY0455700.0AY045570.1 Nicotiana tabacum bZIP transcription factor BZI-2 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009619503.11e-125PREDICTED: bZIP transcription factor 11-like
RefseqXP_016497886.11e-125PREDICTED: bZIP transcription factor 53-like
SwissprotC0Z2L52e-44BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A1S4C9U81e-123A0A1S4C9U8_TOBAC; bZIP transcription factor 53-like
STRINGXP_009619503.11e-124(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-45basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]