PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016495136.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | EIL | ||||||||
Protein Properties | Length: 618aa MW: 70238.5 Da PI: 5.3469 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 522 | 2.6e-159 | 52 | 431 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 +el++rmw+d+m+lkrlke++k ke ++a k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lr+WW XP_016495136.1 52 DELERRMWRDKMKLKRLKEMTKG---GKEG-VDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWW 142 79********************7...5787.9*************************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS EIN3 96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190 k+kv+fdrngpaai+kyqa+n+i++++++++ ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWPtG+e+ww++lglskdq XP_016495136.1 143 KDKVRFDRNGPAAIAKYQADNAIPGKNEGSNP-IGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGQEDWWPQLGLSKDQ 236 ****************************9987.9************************************************************* PP -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.XXXXXXXXXXXXXXXXX CS EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.slrkqspkvtlsceqke 282 g+ppykkphdlkkawkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++l+++nqee ++++++++ ++ s+ +s +t+++++++ XP_016495136.1 237 GPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEVLARELYPDrcPPlSSAGGSGTFTMNDSSEY 331 *************************************************************************863357777************* PP XXX.XXXXXX.XXXXXXXXXX...............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXX CS EIN3 283 dve.gkkeskikhvqavktta...............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifad 345 dv+ + +e++ +vq++k ++ +++++rkrk + +e + ++++ ++tc+ q+++se +++f+d XP_016495136.1 332 DVDgVVDEPN-FDVQEQKPNHlgllnvnvdrfkerlpmqqqslpikdeimiaNLDFTRKRK-PADELTFLMDQK-IYTCECLQCPHSELRNGFQD 423 ***6556666.99******99***************************************9.777777777776.5******************* PP XXXXXXXX CS EIN3 346 knsisqne 353 ++s+++++ XP_016495136.1 424 RSSRDNHQ 431 ******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 4.4E-131 | 52 | 300 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 5.3E-76 | 174 | 310 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.7E-62 | 179 | 303 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 618 aa Download sequence Send to blast |
MMMFEEMGFC GDLDFFPAPL KEVETAASQI EQEQEQEPVM DDDYSDEEID VDELERRMWR 60 DKMKLKRLKE MTKGGKEGVD AVKQRQSQEQ ARRKKMSRAQ DGILKYMLKM MEVCKAQGFV 120 YGIIPEKGKP VTGASDNLRE WWKDKVRFDR NGPAAIAKYQ ADNAIPGKNE GSNPIGPTPH 180 TLQELQDTTL GSLLSALMQH CDPPQRRFPL EKGVPPPWWP TGQEDWWPQL GLSKDQGPPP 240 YKKPHDLKKA WKVGVLTAVI KHMSPDIAKI RKLVRQSKCL QDKMTAKESA TWLAIINQEE 300 VLARELYPDR CPPLSSAGGS GTFTMNDSSE YDVDGVVDEP NFDVQEQKPN HLGLLNVNVD 360 RFKERLPMQQ QSLPIKDEIM IANLDFTRKR KPADELTFLM DQKIYTCECL QCPHSELRNG 420 FQDRSSRDNH QLTCPFRNSP QFGVSNFHVD EVKPVVFPQQ YVQPKPASLP INQAPPSFDL 480 SGIGVPEDGQ RMINELMSFY DNNIQGNKSS MAGNVVMSKE QPRQQPSIQQ NNYLHNQGII 540 LDGNIFGDTN ISANHSMFPQ GDRFDQSKVL TSPFNAGSND NFHFMFGSPF NLQSTDYTEA 600 LSGITQDNMP KQDVPVWY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 7e-85 | 178 | 309 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 7e-85 | 178 | 309 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY248903 | 0.0 | AY248903.1 Nicotiana tabacum EIL1 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001312850.1 | 0.0 | protein ETHYLENE INSENSITIVE 3-like | ||||
Refseq | XP_009587969.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Refseq | XP_016495135.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Refseq | XP_016495136.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | Q84QD4 | 0.0 | Q84QD4_TOBAC; EIL1 | ||||
STRING | XP_009587969.1 | 0.0 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |
Link Out ? help Back to Top | |
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Entrez Gene | 107814269 |