PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016494111.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 467aa    MW: 52520.2 Da    PI: 6.9901
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016494111.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.4e-11173213441
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                      k  rr+++NReAAr+sR+RKka+i++Le    + ++Le+e
  XP_016494111.1 173 HKTLRRLAQNREAARKSRLRKKAYIQQLESsrvRLAQLEQE 213
                     5889************************9732344555554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.2E-7170249IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.0E-8171216No hitNo description
PROSITE profilePS502179.209172216IPR004827Basic-leucine zipper domain
CDDcd147082.06E-21174226No hitNo description
PfamPF001705.4E-8174213IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.31E-7174216No hitNo description
PROSITE patternPS000360177192IPR004827Basic-leucine zipper domain
PfamPF141441.9E-29265340IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MGLESDNQIS FGSDHQQHLL FHNSQHQISF GMLQQSSSTS SVIPGNFISK DINTGGANYD  60
LGELDQAFFL YLDGQDPSSN HLRENNSEMR PPTLNIFPSQ PMHVEPSSTK ANTGLVSSGS  120
QKSSQPSIME LTNSKNDVLS AASGPEPKVA KREWNRKGLN SGSEKDAPKI PDHKTLRRLA  180
QNREAARKSR LRKKAYIQQL ESSRVRLAQL EQELQRARSQ GFHFGGNALL GGDQALPVNR  240
GSMSSDAAVF DMEYARWVEE HHRLICELRS AVVEEHLPEN ELRMYVDNCL THYDQIMNLK  300
SMLAKSDVFH LVSGMWKTPA ERCSIWMGDF RPSELIKIIL SQIEPLTEEQ FVGICGLQQS  360
TQEAESALSQ GLEALNQSLS DTFVSDALAN CPQNMANYMG QMALAINKLS TLEVFFRQAE  420
NLRHQTIHRL HQILTSRQAA RCFLAIAEYF HRLRALSSLW VARPRQE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016494111.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A1S4BYY00.0A0A1S4BYY0_TOBAC; transcription factor HBP-1b(C38)-like
STRINGXP_009626969.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22792145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.30.0bZIP family protein