PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_016491038.1

Organism

Nicotiana tabacum

Taxonomic ID

4097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

VOZ

Protein Properties

Length: 476aa MW: 52868.4 Da PI: 5.5422

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_016491038.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	423.7	3e-130	196	415	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 pppsaflgpkc+lwdc+rpa gs+w+q dycs +ha+la neg pgt pv+rp gi+lkd+llf+alsak qgk+vgipecegaatakspwna XP_016491038.1 196 PPPSAFLGPKCSLWDCPRPAMGSDWCQkshDYCSDYHASLAPNEGYPGTPPVVRPMGIGLKDNLLFQALSAKSQGKDVGIPECEGAATAKSPWNA 290 89*********************976668************************************************************ PP VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlel 187 +elfdl+++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+e+gglkrsyymdpqp++++ewhlyeyein++d +alyrlel XP_016491038.1 291 PELFDLKVVEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEYGGLKRSYYMDPQPMKNLEWHLYEYEINKYDPCALYRLEL 385 ******************************************************************************************* PP VOZ 188 klvdekksakgkvskdsladlqkklgrlta 217 klvd+kks+kgkv+k+s+adlqk++grlta XP_016491038.1 386 KLVDGKKSPKGKVTKESVADLQKQMGRLTA 415 **************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence Send to blast
MGKGSKSGAG KSASHQLFKD KAKNRVDDLQ GVFTNLQSAR KESRTYDVGV LEEQVHQMLR 60 EWRAELNEPS PASSLQGGSL VSSDIYRLLL GEEEDDATSA LAAPKPEPDA QKNDVAAFQE 120 GFNVTPVLQE QGYQLVDQCK SMPLVVNNAG INNLGIATQQ DYNSFDLQQD FDQYFPGFDA 180 LNLCLEDVLP PVHISPPPSA FLGPKCSLWD CPRPAMGSDW CQKSHDYCSD YHASLAPNEG 240 YPGTPPVVRP MGIGLKDNLL FQALSAKSQG KDVGIPECEG AATAKSPWNA PELFDLKVVE 300 GETIREWLFF DKPRRAFESG NRKQRSLPDY NGRGWHESRK QVMNEYGGLK RSYYMDPQPM 360 KNLEWHLYEY EINKYDPCAL YRLELKLVDG KKSPKGKVTK ESVADLQKQM GRLTAEFPSE 420 NKRSVKGRAK ANSKDVAVNM HAVPNLIVPA SEGLNYGTGA PFPDYLVDNL GGYYVT

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence Send to blast

MGKGSKSGAG KSASHQLFKD KAKNRVDDLQ GVFTNLQSAR KESRTYDVGV LEEQVHQMLR  60
EWRAELNEPS PASSLQGGSL VSSDIYRLLL GEEEDDATSA LAAPKPEPDA QKNDVAAFQE  120
GFNVTPVLQE QGYQLVDQCK SMPLVVNNAG INNLGIATQQ DYNSFDLQQD FDQYFPGFDA  180
LNLCLEDVLP PVHISPPPSA FLGPKCSLWD CPRPAMGSDW CQKSHDYCSD YHASLAPNEG  240
YPGTPPVVRP MGIGLKDNLL FQALSAKSQG KDVGIPECEG AATAKSPWNA PELFDLKVVE  300
GETIREWLFF DKPRRAFESG NRKQRSLPDY NGRGWHESRK QVMNEYGGLK RSYYMDPQPM  360
KNLEWHLYEY EINKYDPCAL YRLELKLVDG KKSPKGKVTK ESVADLQKQM GRLTAEFPSE  420
NKRSVKGRAK ANSKDVAVNM HAVPNLIVPA SEGLNYGTGA PFPDYLVDNL GGYYVT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009776508.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_009776509.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_016491038.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_016491039.1	0.0	PREDICTED: transcription factor VOZ1-like
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1S4BQG3	0.0	A0A1S4BQG3_TOBAC; transcription factor VOZ1-like
TrEMBL	A0A1U7WPA8	0.0	A0A1U7WPA8_NICSY; transcription factor VOZ1-like
STRING	XP_009776508.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]