PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016479577.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 305aa    MW: 33807.6 Da    PI: 5.6389
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016479577.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.52.2e-11176221550
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                     kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  XP_016479577.1 176 KRIKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVA 221
                     899**********************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.3E-14172236IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.703174226IPR004827Basic-leucine zipper domain
PfamPF001706.8E-10176221IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.9E-14176227No hitNo description
SuperFamilySSF579591.55E-11176230No hitNo description
CDDcd147032.95E-24177227No hitNo description
PROSITE patternPS000360179194IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MAQLPPKVPT MAHNWPFQTM PPLHNNNNNN NNSWVDDFLD FSSARRNSHR RSVSDPIAFV  60
EAAPFLQQCH GGANSNIGFD KLDDEQLTTM FSDDSGGTAA FAVPTAPSSN PSSTNPSTPS  120
DQISENEDQK LVPPLDVNQV IQPKNEPGEV DSFCDTQPLP APANDSSDNN PIVDPKRIKR  180
ILANRQSAQR SRVRKLQYIS ELERSVTSLQ TEVSALSPRV AFLDHQRLLL NVDNSALRQR  240
IAALAQDKIF KDAHQEALKK EIERLRQIYH EQNMKKMGIN GTADAPPSAA EPLSTFNKMS  300
CTEEA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755193e-49HG975519.1 Solanum lycopersicum chromosome ch07, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016479577.10.0PREDICTED: basic leucine zipper 61-like
SwissprotQ9M2K46e-95BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A1S4AS610.0A0A1S4AS61_TOBAC; basic leucine zipper 61-like
STRINGXP_009627193.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17752465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-91bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]