PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_016472325.1

Organism

Nicotiana tabacum

Taxonomic ID

4097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 422aa MW: 45237.6 Da PI: 8.6892

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_016472325.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.8	3.2e-15	358	409	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ ee+ ++ XP_016472325.1 358 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQEEMLEMQ 409 79***************************************98887766654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	6.4E-15	350	416	No hit	No description
SMART	SM00338	4.9E-14	354	419	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.542	356	405	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.9E-13	358	410	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.88E-11	358	407	No hit	No description
CDD	cd14707	9.75E-30	358	412	No hit	No description
PROSITE pattern	PS00036	0	361	376	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence Send to blast
MGSNFNFKNF GNEPPGEGGS SVGGKQPGNF QLPRQPSIYS LTFDEFLSTT GGSGKDFGSM 60 NMDELLKNIW NAEESQTMGG SGINGQEVGS VQSGNLQRQG SLTLPRTLSH KTVDEVWKDM 120 SKEYGGGKDG NSIGVSATLP QRQQTLGEIT LEEFLVRAGV VREDAQLAAK SNNVGGIFAD 180 LSYAGNNTGV GFGYQQANRN TGETGIQAAN LPLNVNGVRT QQQLRAQQLQ QQQPQPQQQQ 240 PQQQPLFPKQ PALAYAAPMA IPNNGQLGSP GMRGGLVGIS DPALNSNFVQ GAALTGGGMG 300 MVGLGAGAVT VATASPAVSS DGLGKSSGDT PSVSPLPYVF NGGIRGRKYS TVEKVVERRQ 360 RRMIKNRESA ARSRARKQAY TMELEAEVAK LKEENEELQK KQEEMLEMQK NQVMEMMNLF 420 RD

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence Send to blast

MGSNFNFKNF GNEPPGEGGS SVGGKQPGNF QLPRQPSIYS LTFDEFLSTT GGSGKDFGSM  60
NMDELLKNIW NAEESQTMGG SGINGQEVGS VQSGNLQRQG SLTLPRTLSH KTVDEVWKDM  120
SKEYGGGKDG NSIGVSATLP QRQQTLGEIT LEEFLVRAGV VREDAQLAAK SNNVGGIFAD  180
LSYAGNNTGV GFGYQQANRN TGETGIQAAN LPLNVNGVRT QQQLRAQQLQ QQQPQPQQQQ  240
PQQQPLFPKQ PALAYAAPMA IPNNGQLGSP GMRGGLVGIS DPALNSNFVQ GAALTGGGMG  300
MVGLGAGAVT VATASPAVSS DGLGKSSGDT PSVSPLPYVF NGGIRGRKYS TVEKVVERRQ  360
RRMIKNRESA ARSRARKQAY TMELEAEVAK LKEENEELQK KQEEMLEMQK NQVMEMMNLF  420
RD

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KF736850	0.0	KF736850.1 Nicotiana tabacum ABRE binding factor (ABF2) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016472325.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Swissprot	Q9M7Q4	1e-121	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A1S4A6S6	0.0	A0A1S4A6S6_TOBAC; ABSCISIC ACID-INSENSITIVE 5-like protein 5
STRING	XP_009793574.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA776	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	4e-87	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]