PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016461097.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 299aa    MW: 34583.2 Da    PI: 5.2685
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016461097.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.44.1e-21341555128
             NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                     ++F+ +d +l+++ L k ++gk l++e  i  vdiy+ ePw+L   +++ +k  yf s+ +kk++t+ r +r+t +g W ++ k k++l++ ++ 
  XP_016461097.1  34 VQFRLSDTNLIMQ-LLKFLAGKCLPTEGLIGFVDIYSKEPWQLIGDISS-KKTHYFLSQLKKKKPTDARFKRTTGNGSWTQQNKGKKILDEdGSL 126
                     78999******77.567888999999899**************866644.57789999********************************94555 PP

             NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                      +g k++L +   ++ ++ + +W+m ey l
  XP_016461097.1 127 IIGYKRSLSYK-HKKDSSLNGRWLMMEYFL 155
                     69*******98.5666669*********76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.6130179IPR003441NAC domain
PfamPF023658.1E-933154IPR003441NAC domain
SuperFamilySSF1019411.01E-2134178IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
NLRYALSYSH SDKVFCAIFL QSLQERREPM EKNVQFRLSD TNLIMQLLKF LAGKCLPTEG  60
LIGFVDIYSK EPWQLIGDIS SKKTHYFLSQ LKKKKPTDAR FKRTTGNGSW TQQNKGKKIL  120
DEDGSLIIGY KRSLSYKHKK DSSLNGRWLM MEYFLADSLL QELKSNEAKE FVICAIMKNP  180
RSEIRGNTDA TIVEYKRFID RVLQEGVHLQ TSEPSQQSIM ILSKNSPMMS ESTSSDVLSM  240
GQLEQNNGML VQTDSDEFFG ILNVQNQECY YQEGDEEEFD WDSFLDFDDH GFVQNDLVY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532650.0EU753265.1 Nicotiana tabacum NAC transcription factor (NAC8) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016461097.10.0PREDICTED: uncharacterized protein LOC107784474, partial
TrEMBLA0A1S3ZA510.0A0A1S3ZA51_TOBAC; uncharacterized protein LOC107784474
STRINGXP_009618980.11e-178(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9815725
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.16e-15NAC domain containing protein 96