PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_016448483.1

Organism

Nicotiana tabacum

Taxonomic ID

4097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 382aa MW: 42201.1 Da PI: 7.1636

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_016448483.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22.5	2.5e-07	35	96	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e+e +r r NRe+Ar +R++a eeL++k++ L +eN+ Lkk+ e e+++lk+e XP_016448483.1 35 EREERRLCRVLANRESARQTIRRRQAMYEELTKKAADLASENENLKKKKELAAREYESLKNE 96 678889999999************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.3E-6	35	99	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.071	37	100	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.19E-5	39	95	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.8E-4	40	96	No hit	No description
CDD	cd14702	2.83E-12	43	90	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence Send to blast
MPPEQESELK TSLRHALNYP PIASRRSRQN LTEEEREERR LCRVLANRES ARQTIRRRQA 60 MYEELTKKAA DLASENENLK KKKELAAREY ESLKNEHTSL RIRVAKIEKA EAEEIDGGSK 120 SKPVEISSTS TAATPTPTPN PILTSLFNQS PIAPFFWPSI IQPFNAFLLQ CGSQNISDIT 180 SVLPSPTSGE LNSINRQESS NPGNPLFVLP FPCLIPFHPQ SSSPFLPLSS TLTDKHAETS 240 LVHQCSTSYL NTENNQAAIA HEVEADAPQS IKATQRDFLH KPALCFPPEG GASEGSRQPS 300 SSHIQLGTYE RISSQQDNAP DIGAVSCTVG HVADTSEKTS QECIISSSKT PVDAHAAAEA 360 RKRRKELLKL RSQHSDQFGP HH

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence Send to blast

MPPEQESELK TSLRHALNYP PIASRRSRQN LTEEEREERR LCRVLANRES ARQTIRRRQA  60
MYEELTKKAA DLASENENLK KKKELAAREY ESLKNEHTSL RIRVAKIEKA EAEEIDGGSK  120
SKPVEISSTS TAATPTPTPN PILTSLFNQS PIAPFFWPSI IQPFNAFLLQ CGSQNISDIT  180
SVLPSPTSGE LNSINRQESS NPGNPLFVLP FPCLIPFHPQ SSSPFLPLSS TLTDKHAETS  240
LVHQCSTSYL NTENNQAAIA HEVEADAPQS IKATQRDFLH KPALCFPPEG GASEGSRQPS  300
SSHIQLGTYE RISSQQDNAP DIGAVSCTVG HVADTSEKTS QECIISSSKT PVDAHAAAEA  360
RKRRKELLKL RSQHSDQFGP HH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	360	365	RKRRKE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016448483.1	0.0	PREDICTED: uncharacterized protein LOC107773596
TrEMBL	A0A1S3Y939	0.0	A0A1S3Y939_TOBAC; uncharacterized protein LOC107773596
STRING	XP_009611161.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5417	17	24

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	5e-14	bZIP family protein