PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016446354.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 182aa    MW: 21317.8 Da    PI: 7.3991
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016446354.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.11.5e-18101485128
             NAM   5 frFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk..........kvkaeekew.yfFskrdkkyatgkrknr.atksgyWka 85 
                     +rF+Ptd+e + + L + +++++++ + +  +++d+y   ePw++ +            +a+++++ yf +k +kk++     nr + ++g Wk+
  XP_016446354.1  10 YRFRPTDSERL-KLLLRFIAKQEMNDSGFiTTNIDVYGGeEPWEIYNhgvscgndddD-NADSSNYrYFITKLKKKSKA--GYNReVGNKGSWKQ 100
                     49********9.7788888888877777735566**98659****7446766555421.12222332666655555443..445547889***** PP

             NAM  86 tgkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + k k+v+ +     +  ++g+kk+L + +++  + +  +W+m+ey+l
  XP_016446354.1 101 QDKAKSVHYEnvgnsSLVVIGCKKSLCYVNKEYYNQNDGHWLMKEYEL 148
                     *******998665433444************999*9**********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.7956171IPR003441NAC domain
SuperFamilySSF1019416.15E-1710169IPR003441NAC domain
PfamPF023652.7E-1210148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MEQQLQEGFY RFRPTDSERL KLLLRFIAKQ EMNDSGFITT NIDVYGGEEP WEIYNHGVSC  60
GNDDDDNADS SNYRYFITKL KKKSKAGYNR EVGNKGSWKQ QDKAKSVHYE NVGNSSLVVI  120
GCKKSLCYVN KEYYNQNDGH WLMKEYELSS VILQKFDEDR RDYVLCAIKR MPHSTDYARC  180
LN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016446354.11e-135PREDICTED: NAC domain-containing protein 78-like isoform X1
TrEMBLA0A1S3Y2J41e-134A0A1S3Y2J4_TOBAC; NAC domain-containing protein 78-like isoform X1
STRINGXP_009766553.11e-131(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.14e-08NAC domain containing protein 2