PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016443698.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 502aa    MW: 56247.1 Da    PI: 6.8804
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016443698.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.16e-11211250541
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                     k  rr+++NReAAr+sR+RKka++++Le+   + ++Le+e
  XP_016443698.1 211 KTLRRLAQNREAARKSRLRKKAYVQQLETsriRLAQLEQE 250
                     7789***********************9633356666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.8E-8202255No hitNo description
SMARTSM003381.1E-7207279IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.887209253IPR004827Basic-leucine zipper domain
PfamPF001704.4E-8211250IPR004827Basic-leucine zipper domain
CDDcd147085.27E-21211263No hitNo description
SuperFamilySSF579598.44E-7211247No hitNo description
PROSITE patternPS000360214229IPR004827Basic-leucine zipper domain
PfamPF141442.7E-30302376IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 502 aa     Download sequence    Send to blast
MGFEGSYSTE QENKLSFGVG VHFMASSNKS NDDLLLNNNS QISFGSQQQF FHSPQQQHDQ  60
HQLQNNSNQI SFGLLQQQSS SSSNPGNFIN KDNSGAYDLG ELDQALFLYL DGQEPSSIQD  120
QRQNSGMRPP TLNIFPSQPM HIEPSSTKAN NGLVSQSTSG SKKSSQPSMA KTDIIPSASG  180
PEPPKTAKRE GIRKGPTSSS EQDAPKTPDP KTLRRLAQNR EAARKSRLRK KAYVQQLETS  240
RIRLAQLEQE IQRARSQGFY AGGSALQAGD QGLAVNMANI SSDAAIFDLE YARWLEEHHR  300
LMCELRNAVQ EHLQENELRI YVENCITHYD EIMNLKCMLA KSDVFHLVSG LWKTPAERCF  360
LWMGDFRPSE LLKIILSQIE PLTENQLMGI CGLQQSTQEA EDALSQGLES LNQSISDTIA  420
SDALACPQNM ANYMGQMALA MNKLSTVEGF LRQADNLRHQ MIHRLHQILT TRQAARCFLS  480
IGEYFHRLRA LSSLWLARPR QE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009602906.10.0PREDICTED: transcription factor TGA2.2-like
RefseqXP_016443698.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A1S3XUS30.0A0A1S3XUS3_TOBAC; transcription factor HBP-1b(C38)-like
STRINGXP_009602906.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22792145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-175bZIP family protein