PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016442662.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 812aa    MW: 86937 Da    PI: 5.7097
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016442662.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.84.8e-13340400262
                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                     ++ k+  r+++NRe+A+ sRqRKk ++eeLe+kv  + +  ++L  +++ +  e a+lk++
  XP_016442662.1 340 EDEKKRARLIRNRESAQLSRQRKKHYVEELEDKVRIMHSTIQDLNAKISYIIAENATLKTQ 400
                     5678999*****************************************9999999999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.6E-16339403IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.266341401IPR004827Basic-leucine zipper domain
PfamPF001701.5E-11342400IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.5E-16343401No hitNo description
SuperFamilySSF579592.38E-12343401No hitNo description
CDDcd147043.42E-20344395No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 812 aa     Download sequence    Send to blast
MADPILADPP PSATENPTGE FDGLPIPPLD PTYFAQHMTA ADQGKINGFP MELPEDDEFM  60
LDDLDFDLSF DDIFLNNGDA VLSPDFLADC LGSDTDRVDP SCYGLPGNQL IGNFDNSSGE  120
EPPGSKFVPA DPNCFGQPGS QLVGDFDDSS RYFKSTSAEF CNFSGNQAAG GVMIMDTSSP  180
ELRQSSSGSD VLNATSSTSS HQVSGDVSGY LNVPSPESNG SNHEGSRESG NDNKGLGDAR  240
VLNCHSPESQ GSGNCGSNVS EGLNYPSDSN KSVHSSPNFG NNSIKNGVVE EKIKLEGVNA  300
NISNCSSLLK RKKSSEDSNN IGIHQKLTND GLIDNVNNDE DEKKRARLIR NRESAQLSRQ  360
RKKHYVEELE DKVRIMHSTI QDLNAKISYI IAENATLKTQ LGGAGVPSQV PPPPPGMYPH  420
HPVMYPWMPY TPPYMVKPQG SQVPLVPIPK LKPQGTAPAP KSSKKVEKNR TEVKTKKVAS  480
VSFLGLLFFM LLFGGLVPLL NVRYGGMREP FMSGDSFGSG SYEKHYGRVL AVDGPVNGTG  540
HPGKYSGKDY SSHCGRRGQD ESAQPKVNGS DPLAASLYVP RNDKLVKIDG NLIIHSVLAS  600
EKAMASHGGA DKNNRETGLA VPGDLAPAIA GSHPHLYRSP AVGQRALGTG EENGKSTVQQ  660
WFLEGVAGPL LSSGMCTEVF QFDVSSSAPG AVVPATNARN LSMEERQNAT HVHKVRNRRI  720
LNGPSVSLSR PSHNISEEQT GKQENLSGNK SLSSMVVSVL VDPREAGDGD VDGMMGPKSL  780
SRIFVVVLID SVKYVTYSCM LPFKGSVPLV TT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1705718RQNATHVHKVRNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankX164500.0X16450.1 Tobacco mRNA for TGA1b DNA-binding protein.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016442662.10.0PREDICTED: bZIP transcription factor 17-like
TrEMBLA0A1S3XSK60.0A0A1S3XSK6_TOBAC; bZIP transcription factor 17-like
STRINGXP_009610632.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30292450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.11e-132bZIP family protein