PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_016439653.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 182aa MW: 20800.3 Da PI: 10.6287 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.3 | 3.8e-14 | 100 | 143 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr+rr++kNRe+A rsR+RK+a+++eLe + L +eN++Lk XP_016439653.1 100 KRQRRMIKNRESAARSRARKQAYTAELEIELNGLREENEKLKLL 143 9*************************************999833 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.3E-13 | 91 | 148 | No hit | No description |
SMART | SM00338 | 6.7E-11 | 96 | 160 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.691 | 98 | 147 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.31E-10 | 100 | 146 | No hit | No description |
CDD | cd14707 | 2.92E-19 | 100 | 154 | No hit | No description |
Pfam | PF00170 | 6.0E-12 | 100 | 160 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 103 | 118 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 182 aa Download sequence Send to blast |
MHLFHGNILP AGQHSRYAFL SHSKCAENGK GDADSSSTHH QIFEQVNGGF INGHQISDQI 60 TTTNKENIEN SNSASDVSEP INNSRRRSSS VSIEATVMEK RQRRMIKNRE SAARSRARKQ 120 AYTAELEIEL NGLREENEKL KLLVAQIATR RKDEEEKMKQ PTKAQWIANK LRRLRRMSSV 180 SW |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_016439653.1 | 1e-133 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | A0A1S3XIB4 | 1e-131 | A0A1S3XIB4_TOBAC; ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
STRING | XP_009623872.1 | 1e-131 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA16902 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G45249.1 | 1e-19 | abscisic acid responsive elements-binding factor 2 |