PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016438491.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 325aa    MW: 35160 Da    PI: 5.8382
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016438491.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.54.5e-1665942655
         G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55
                     AtPk +l++m+v+gLt++hvkSHLQkYRl
  XP_016438491.1 65 GATPKGVLRVMGVQGLTIYHVKSHLQKYRL 94
                    69***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.15E-66194IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.1E-156495IPR009057Homeodomain-like
TIGRFAMsTIGR015575.6E-116695IPR006447Myb domain, plants
PfamPF143792.9E-22126172IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MYQPKGVPGS SLVHNNAAVH SQLLDCDDGS MDPTSGGNNN XTEVSSILVF TDLLYSSEIL  60
FSVSGATPKG VLRVMGVQGL TIYHVKSHLQ KYRLAKYLPD SSSDGKKPDK KESRDMLSSL  120
DGSSGVEITT ALKLQMEVQK RLHEQLEVQK QLQLRIEAQG KYLKKIIEEQ QRLSGVLSEV  180
PGSGVTAPPT GDNGPESDNR SEPGTPAPTS ESPNVEKHVK AHAPTKSLSV DESFSLQHEP  240
LTPDSDCPES SPMESPNGER SSKKQRVATS AAFAKDDVAL THQILESSLS SPYQQPPSVF  300
ITRDQFNRTS GLSLGIEDQK VSGNM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016438491.10.0PREDICTED: uncharacterized protein LOC107764443
SwissprotQ9SJW01e-100PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A1S3XES00.0A0A1S3XES0_TOBAC; uncharacterized protein LOC107764443
STRINGXP_009615786.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27962451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-88G2-like family protein