PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_016432550.1

Organism

Nicotiana tabacum

Taxonomic ID

4097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

VOZ

Protein Properties

Length: 501aa MW: 56101.4 Da PI: 5.9978

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_016432550.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	410.4	3.4e-126	222	441	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewl...qdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 pp saflgpkcalwdc+rpa gs+w+ qdycs +ha+la neg +g pv+rp gi+lkd+llf+al ak++gk+vg+pecegaatakspwna XP_016432550.1 222 PPASAFLGPKCALWDCPRPAMGSDWCqksQDYCSDYHASLAPNEGYLGRPPVVRPMGIGLKDNLLFQALGAKAHGKDVGVPECEGAATAKSPWNA 316 789********************944459************************************************************ PP VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlel 187 +elfdl+++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkq+m+efgglkrsyymdpqp++++ewhlyeyein++da+alyrlel XP_016432550.1 317 PELFDLKVVEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQMMNEFGGLKRSYYMDPQPMKNLEWHLYEYEINKYDACALYRLEL 411 ******************************************************************************************* PP VOZ 188 klvdekksakgkvskdsladlqkklgrlta 217 klvd+kk +kgkv++ s++dlqk++grlta XP_016432550.1 412 KLVDGKKIPKGKVTNVSVSDLQKQMGRLTA 441 **************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence Send to blast
MWKGSKSGAG KSASHQLFKD RAKNRVDDLQ GVLTNLQSAR KESRSYDVGL LEEQVHQMLR 60 EWKAELNEPS PASSLQASVF KYWWCRDIQL RVLHSWGTLQ GGSLVSSSDI YRLLLGEEED 120 DATSALAAPK PEPDAQKVSV TDFQEGFNAT QVLHEQGFQL VDQCKGLPSV VNSAGINNLG 180 IATQLDYHSF DLHQEYDQQY LPGFDALNLC LEDALPPIHI SPPASAFLGP KCALWDCPRP 240 AMGSDWCQKS QDYCSDYHAS LAPNEGYLGR PPVVRPMGIG LKDNLLFQAL GAKAHGKDVG 300 VPECEGAATA KSPWNAPELF DLKVVEGETI REWLFFDKPR RAFESGNRKQ RSLPDYNGRG 360 WHESRKQMMN EFGGLKRSYY MDPQPMKNLE WHLYEYEINK YDACALYRLE LKLVDGKKIP 420 KGKVTNVSVS DLQKQMGRLT AEFPLDNKRT VKGRSKAASL KNVGNIQAAP IPMVLTCEGF 480 DYGTGESYDY LVDDLDGYFI T

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence Send to blast

MWKGSKSGAG KSASHQLFKD RAKNRVDDLQ GVLTNLQSAR KESRSYDVGL LEEQVHQMLR  60
EWKAELNEPS PASSLQASVF KYWWCRDIQL RVLHSWGTLQ GGSLVSSSDI YRLLLGEEED  120
DATSALAAPK PEPDAQKVSV TDFQEGFNAT QVLHEQGFQL VDQCKGLPSV VNSAGINNLG  180
IATQLDYHSF DLHQEYDQQY LPGFDALNLC LEDALPPIHI SPPASAFLGP KCALWDCPRP  240
AMGSDWCQKS QDYCSDYHAS LAPNEGYLGR PPVVRPMGIG LKDNLLFQAL GAKAHGKDVG  300
VPECEGAATA KSPWNAPELF DLKVVEGETI REWLFFDKPR RAFESGNRKQ RSLPDYNGRG  360
WHESRKQMMN EFGGLKRSYY MDPQPMKNLE WHLYEYEINK YDACALYRLE LKLVDGKKIP  420
KGKVTNVSVS DLQKQMGRLT AEFPLDNKRT VKGRSKAASL KNVGNIQAAP IPMVLTCEGF  480
DYGTGESYDY LVDDLDGYFI T

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT014516	0.0	BT014516.1 Lycopersicon esculentum clone 133906R, mRNA sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016432550.1	0.0	PREDICTED: transcription factor VOZ1-like
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1S3WXY3	0.0	A0A1S3WXY3_TOBAC; transcription factor VOZ1-like
STRING	XP_009597399.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]