PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009802843.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 206aa MW: 22650.3 Da PI: 10.3631 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 52.1 | 1.5e-16 | 135 | 182 | 3 | 50 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++++ +r++kNRe+A rsR+RK+a++ eLe+kv+ L +eN +Lkk+ + XP_009802843.1 135 SDQKNKRMIKNRESAARSRARKQAYTNELEQKVAHLMEENVRLKKQQQ 182 7899****************************************9765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.6E-14 | 128 | 182 | No hit | No description |
SMART | SM00338 | 3.5E-11 | 133 | 201 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.921 | 135 | 184 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.4E-14 | 136 | 181 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.84E-24 | 137 | 191 | No hit | No description |
SuperFamily | SSF57959 | 2.19E-11 | 138 | 183 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 140 | 155 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MEEVWKNINL SSLNGDTTTS SRDHIDPQQN ISNSTNFGGM ILQDFLARPF ANNPKTAAKG 60 YVPPIFPPPA AAAAVTVLTL NSGPGLHFFG NLRQNSSSEQ QKSISNTSFE DLASPVGGNT 120 NGRKRCSESD DNNSSDQKNK RMIKNRESAA RSRARKQAYT NELEQKVAHL MEENVRLKKQ 180 QQPLCLAAAA QLPKKKSLYR TSTAPF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009802843.1 | 1e-152 | PREDICTED: protein FD-like | ||||
Swissprot | Q84JK2 | 3e-41 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A1U7YI92 | 1e-151 | A0A1U7YI92_NICSY; protein FD-like | ||||
STRING | XP_009802843.1 | 1e-152 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3572 | 22 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17770.2 | 1e-29 | basic region/leucine zipper motif 27 |