PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009801092.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 272aa    MW: 31455.5 Da    PI: 7.3893
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009801092.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.74.5e-23121403127
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     +G+rF Pt+ el+ ++Lk+ +++k+l+ e   ++ +diy    Pw++  ++ ++ eek  yfF++ +k++++ +r +r+ ++g+Wk + k  +++
  XP_009801092.1  12 MGVRFYPTEAELI-NFLKRFLKSKPLPSECPnFQLADIYGDqPPWEIFrANSDHpEEKVRYFFTRLKKQKSEHTRVRRTCANGTWKVQTKGFPIK 105
                     7************.9**********88755559999***87368***6233333244566*********************************** PP

             NAM  94 skkgelvglkktLvfykgrapkgektd.Wvmheyr 127
                     + kg++vg ++++ f + ++++ge+ + W+m+ey 
  XP_009801092.1 106 NGKGTVVGFRRSFKFQSSSTKEGENNKiWLMKEYF 140
                     ****************998888876544******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.06E-269163IPR003441NAC domain
PROSITE profilePS5100526.36610164IPR003441NAC domain
PfamPF023652.3E-1412139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MSSLPVRRGC IMGVRFYPTE AELINFLKRF LKSKPLPSEC PNFQLADIYG DQPPWEIFRA  60
NSDHPEEKVR YFFTRLKKQK SEHTRVRRTC ANGTWKVQTK GFPIKNGKGT VVGFRRSFKF  120
QSSSTKEGEN NKIWLMKEYF VGDDFFIENN IPKEDIVVCR IKKNTRSEKN HGANMEEQYV  180
ANNVIEAMLH GPDEDYCATV QPAIICQAMN EHNNSSYIND CSNYQEEINW ADGVLVDIDN  240
FGKLWNQNAG KESSNQLTNL VNEVYSIELI EK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532600.0EU753260.1 Nicotiana tabacum NAC transcription factor (NAC3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009801092.10.0PREDICTED: NAC domain-containing protein 90-like
RefseqXP_016510918.10.0PREDICTED: NAC domain-containing protein 53-like
TrEMBLA0A1S4DC450.0A0A1S4DC45_TOBAC; NAC domain-containing protein 53-like
TrEMBLA0A1U7YAE30.0A0A1U7YAE3_NICSY; NAC domain-containing protein 90-like
STRINGXP_009801092.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.17e-18NAC domain containing protein 2